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LOC100539641 LARGE xylosyl- and glucuronyltransferase 1 [ Meleagris gallopavo (turkey) ]

Gene ID: 100539641, updated on 14-Dec-2023

Summary

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Gene symbol
LOC100539641
Gene description
LARGE xylosyl- and glucuronyltransferase 1
See related
Ensembl:ENSMGAG00000012768
Gene type
protein coding
RefSeq status
MODEL
Organism
Meleagris gallopavo
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Meleagridinae; Meleagris
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Genomic context

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See LOC100539641 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
8
Annotation release Status Assembly Chr Location
103 current Turkey_5.1 (GCF_000146605.3) 1 NC_015011.2 (52573434..52621487)
Build 1.1 previous assembly Turkey_2.01 (GCF_000146605.1) 1 NC_015011.1 (53782230..53926879)

Chromosome 1 - NC_015011.2Genomic Context describing neighboring genes Neighboring gene synapsin-3-like Neighboring gene uncharacterized LOC109367699 Neighboring gene LARGE xylosyl- and glucuronyltransferase 1-like Neighboring gene uncharacterized LOC104911456

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LARGE xylosyl- and glucuronyltransferase 1
Names
glycosyltransferase-like protein LARGE1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Meleagris gallopavo Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Turkey_5.1 Primary Assembly

Genomic

  1. NC_015011.2 Reference Turkey_5.1 Primary Assembly

    Range
    52573434..52621487
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010712624.3 → XP_010710926.1  LARGE xylosyl- and glucuronyltransferase 1

    UniProtKB/TrEMBL
    G1NJF6
    Related
    ENSMGAP00000013462.2, ENSMGAT00000014370.2
    Conserved Domains (2) summary
    pfam13896
    Location:198 → 467
    Glyco_transf_49; Glycosyl-transferase for dystroglycan
    cl11394
    Location:20 → 142
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases