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IDH3B isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta [ Meleagris gallopavo (turkey) ]

Gene ID: 100538992, updated on 8-Mar-2024

Summary

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Gene symbol
IDH3B
Gene description
isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta
Gene type
protein coding
RefSeq status
MODEL
Organism
Meleagris gallopavo
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Meleagridinae; Meleagris
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See IDH3B in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
103 current Turkey_5.1 (GCF_000146605.3) Unplaced Scaffold NW_011195332.1 (11547..19523)
Build 1.1 previous assembly Turkey_2.01 (GCF_000146605.1) 5 NC_015015.1 (60174957..60183487)

NW_011195332.1Genomic Context describing neighboring genes Neighboring gene VPS16 core subunit of CORVET and HOPS complexes Neighboring gene small nucleolar RNA SNORD57 Neighboring gene small nucleolar RNA SNORD56 Neighboring gene NOP56 ribonucleoprotein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in isocitrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
isocitrate dehydrogenase [NAD] subunit beta, mitochondrial
Names
isocitrate dehydrogenase (NAD(+)) 3 beta
isocitrate dehydrogenase 3 (NAD(+)) beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Meleagris gallopavo Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Turkey_5.1 Primary Assembly

Genomic

  1. NW_011195332.1 Reference Turkey_5.1 Primary Assembly

    Range
    11547..19523
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010727723.3 → XP_010726025.2  isocitrate dehydrogenase [NAD] subunit beta, mitochondrial

    Conserved Domains (1) summary
    cl00445
    Location:22 → 355
    Iso_dh; Isocitrate/isopropylmalate dehydrogenase
Nucleotide Protein
Heading Accession and Version

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