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RPIA ribose 5-phosphate isomerase A [ Meleagris gallopavo (turkey) ]

Gene ID: 100538675, updated on 8-Mar-2024

Summary

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Gene symbol
RPIA
Gene description
ribose 5-phosphate isomerase A
Gene type
protein coding
RefSeq status
MODEL
Organism
Meleagris gallopavo
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Meleagridinae; Meleagris
Orthologs
human mouse all
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Genomic context

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See RPIA in Genome Data Viewer
Location:
chromosome: 4
Exon count:
6
Annotation release Status Assembly Chr Location
103 current Turkey_5.1 (GCF_000146605.3) 4 NC_015014.2 (68163982..68172693)
Build 1.1 previous assembly Turkey_2.01 (GCF_000146605.1) 4 NC_015014.1 (70038967..70053899)

Chromosome 4 - NC_015014.2Genomic Context describing neighboring genes Neighboring gene succinate-CoA ligase GDP/ADP-forming subunit alpha Neighboring gene uncharacterized LOC109367460 Neighboring gene uncharacterized LOC109367461 Neighboring gene octopamine receptor-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ribose-5-phosphate isomerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in D-ribose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in pentose-phosphate shunt, non-oxidative branch IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ribose-5-phosphate isomerase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Meleagris gallopavo Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Turkey_5.1 Primary Assembly

Genomic

  1. NC_015014.2 Reference Turkey_5.1 Primary Assembly

    Range
    68163982..68172693
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010710657.2 → XP_010708959.1  ribose-5-phosphate isomerase

    Conserved Domains (1) summary
    pfam06026
    Location:36 → 198
    Rib_5-P_isom_A; Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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