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MGAT5B alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B [ Meleagris gallopavo (turkey) ]

Gene ID: 100538548, updated on 8-Mar-2024

Summary

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Gene symbol
MGAT5B
Gene description
alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B
See related
Ensembl:ENSMGAG00000004001
Gene type
protein coding
RefSeq status
MODEL
Organism
Meleagris gallopavo
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Meleagridinae; Meleagris
Orthologs
human mouse all
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Genomic context

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See MGAT5B in Genome Data Viewer
Location:
chromosome: 20
Exon count:
17
Annotation release Status Assembly Chr Location
103 current Turkey_5.1 (GCF_000146605.3) 20 NC_015030.2 (4072780..4110431, complement)
Build 1.1 previous assembly Turkey_2.01 (GCF_000146605.1) 20 NC_015030.1 (4146641..4195079, complement)

Chromosome 20 - NC_015030.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104913756 Neighboring gene small Cajal body-specific RNA 16 Neighboring gene uncharacterized LOC109370531 Neighboring gene major facilitator superfamily domain containing 11 Neighboring gene serine and arginine rich splicing factor 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B
Names
mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Meleagris gallopavo Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Turkey_5.1 Primary Assembly

Genomic

  1. NC_015030.2 Reference Turkey_5.1 Primary Assembly

    Range
    4072780..4110431 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031556300.1 → XP_031412160.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B

    UniProtKB/TrEMBL
    A0A803XSK2
    Related
    ENSMGAP00000030560.1, ENSMGAT00000022156.1
    Conserved Domains (1) summary
    pfam15024
    Location:145 → 743
    Glyco_transf_18; Glycosyltransferase family 18
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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