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LOC100536326 sialoadhesin [ Danio rerio (zebrafish) ]

Gene ID: 100536326, updated on 12-Sep-2024

Summary

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Gene symbol
LOC100536326
Gene description
sialoadhesin
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Orthologs
all
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Genomic context

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See LOC100536326 in Genome Data Viewer
Location:
chromosome: 22
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 22 NC_007133.7 (24913072..24920113, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 22 NC_007133.6 (24886862..24892466, complement)

Chromosome 22 - NC_007133.7Genomic Context describing neighboring genes Neighboring gene vitellogenin 2 Neighboring gene vitellogenin 8 Neighboring gene uncharacterized LOC101886000 Neighboring gene sialoadhesin Neighboring gene sialoadhesin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
sialoadhesin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007133.7 Reference GRCz11 Primary Assembly

    Range
    24913072..24920113 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_068216465.1 → XP_068072566.1  sialoadhesin isoform X3

  2. XM_068216464.1 → XP_068072565.1  sialoadhesin isoform X2

  3. XM_021469702.2 → XP_021325377.2  sialoadhesin isoform X1

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018395108.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    266418..273459 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_068219002.1 → XP_068075103.1  sialoadhesin isoform X3

  2. XM_068219001.1 → XP_068075102.1  sialoadhesin isoform X2

  3. XM_021473503.2 → XP_021329178.2  sialoadhesin isoform X1

Reference GRCz11 ALT_DRER_TU_2

Genomic

  1. NW_018395353.1 Reference GRCz11 ALT_DRER_TU_2

    Range
    77540..84581 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_068219375.1 → XP_068075476.1  sialoadhesin isoform X3

  2. XM_068219374.1 → XP_068075475.1  sialoadhesin isoform X2

  3. XM_021474482.2 → XP_021330157.2  sialoadhesin isoform X1

Nucleotide Protein Strain
Heading Accession and Version

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