otos otospiralin [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: otosprovided by ZNC
Official Full Name: otospiralinprovided by ZNC
Primary source: ZFIN:ZDB-GENE-120601-1
See related: Ensembl:ENSDARG00000108475 AllianceGenome:ZFIN:ZDB-GENE-120601-1
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary: Predicted to be involved in sensory perception of sound. Is expressed in digestive system; gill; inner ear; and swim bladder. Orthologous to human OTOS (otospiralin). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 24

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	24	NC_007135.7 (26302781..26304386, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	24	NC_007135.6 (26157740..26159345, complement)

Chromosome 24 - NC_007135.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Otospiralin and otospiralin-like expression profiles in zebrafish were studied and shows for the first time that otospiralin genes are important for the formation of kinocilia in embryos inner ear.
Title: Gene duplication and functional divergence of the zebrafish otospiralin genes.

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General gene information

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Gene Ontology Provided by ZFIN

Process	Evidence Code	Pubs
involved_in sensory perception of sound	IBA Inferred from Biological aspect of Ancestor more info
acts_upstream_of_or_within sensory perception of sound	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: otospiralin

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.