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MRI1 methylthioribose-1-phosphate isomerase 1 [ Sus scrofa (pig) ]

Gene ID: 100525858, updated on 17-Aug-2024

Summary

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Official Symbol
MRI1provided by VGNC
Official Full Name
methylthioribose-1-phosphate isomerase 1provided by VGNC
Primary source
VGNC:VGNC:90343
See related
Ensembl:ENSSSCG00000013756
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Ubiquitous expression in ovary (RPKM 13.1), spleen (RPKM 10.3) and 8 other tissues See more
Orthologs
human mouse all
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Genomic context

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See MRI1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
6
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 2 NC_010444.4 (65348609..65354892, complement)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 2 NC_010444.3 (65675853..65682136, complement)

Chromosome 2 - NC_010444.4Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110259336 Neighboring gene zinc finger SWIM-type containing 4 Neighboring gene chromosome 2 C19orf53 homolog Neighboring gene YJU2 splicing factor homolog B Neighboring gene calcium voltage-gated channel subunit alpha1 A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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Related articles in PubMed

  1. Comparative analysis of protein coding sequences from human, mouse and the domesticated pig. Jørgensen FG, et al. BMC Biol, 2005 Jan 28. PMID 15679890, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables S-methyl-5-thioribose-1-phosphate isomerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-methionine salvage from methylthioadenosine IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
methylthioribose-1-phosphate isomerase
Names
methylthioribose-1-phosphate isomerase homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010444.4 Reference Sscrofa11.1 Primary Assembly

    Range
    65348609..65354892 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003123346.4 → XP_003123394.3  methylthioribose-1-phosphate isomerase

    UniProtKB/TrEMBL
    A0A8D0KCG6, A0A8D0SAA2, A0A8D0VWJ1, F1SD78
    Related
    ENSSSCP00000014625.3, ENSSSCT00000015030.5
    Conserved Domains (2) summary
    TIGR00512
    Location:4 → 346
    salvage_mtnA; S-methyl-5-thioribose-1-phosphate isomerase
    pfam01008
    Location:44 → 346
    IF-2B; Initiation factor 2 subunit family
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases
Research Materials