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SHISAL1 shisa like 1 [ Sus scrofa (pig) ]

Gene ID: 100522865, updated on 3-Dec-2024

Summary

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Official Symbol
SHISAL1provided by VGNC
Official Full Name
shisa like 1provided by VGNC
Primary source
VGNC:VGNC:92850
See related
Ensembl:ENSSSCG00000039522
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Also known as
KIAA1644
Expression
Broad expression in ovary (RPKM 3.5), heart (RPKM 3.1) and 6 other tissues See more
Orthologs
human mouse all
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Genomic context

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See SHISAL1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
8
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 5 NC_010447.5 (4767436..4849333)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 5 NC_010447.4 (2218197..2299116, complement)

Chromosome 5 - NC_010447.5Genomic Context describing neighboring genes Neighboring gene proline rich 5 Neighboring gene retrotransposon Gag like 6 Neighboring gene uncharacterized LOC110260614 Neighboring gene parvin gamma

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein KIAA1644 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010447.5 Reference Sscrofa11.1 Primary Assembly

    Range
    4767436..4849333
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013997474.2 → XP_013852928.1  uncharacterized protein KIAA1644 homolog

    UniProtKB/TrEMBL
    A0A4X1W456, A0A8D1S8C7
    Conserved Domains (1) summary
    pfam13908
    Location:31 → 71
    Shisa; Wnt and FGF inhibitory regulator

  2. XM_005663743.3 → XP_005663800.1  uncharacterized protein KIAA1644 homolog

    See identical proteins and their annotated locations for XP_005663800.1

    UniProtKB/TrEMBL
    A0A4X1W456, A0A8D1S8C7
    Related
    ENSSSCP00000044189.1, ENSSSCT00000043839.2
    Conserved Domains (1) summary
    pfam13908
    Location:31 → 71
    Shisa; Wnt and FGF inhibitory regulator

  3. XM_021091400.1 → XP_020947059.1  uncharacterized protein KIAA1644 homolog

    UniProtKB/TrEMBL
    A0A4X1W456, A0A8D1S8C7
    Conserved Domains (1) summary
    pfam13908
    Location:31 → 71
    Shisa; Wnt and FGF inhibitory regulator

  4. XM_021091401.1 → XP_020947060.1  uncharacterized protein KIAA1644 homolog

    UniProtKB/TrEMBL
    A0A4X1W456, A0A8D1S8C7
    Conserved Domains (1) summary
    pfam13908
    Location:31 → 71
    Shisa; Wnt and FGF inhibitory regulator
Nucleotide Protein
Heading Accession and Version

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