CLEC12A C-type lectin domain family 12 member A [Sus scrofa (pig)] - Gene

Summary

Official Symbol: CLEC12Aprovided by VGNC
Official Full Name: C-type lectin domain family 12 member Aprovided by VGNC
Primary source: VGNC:VGNC:86745
See related: Ensembl:ENSSSCG00000039287
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Sus scrofa
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression: Broad expression in lung (RPKM 3.6), spleen (RPKM 2.5) and 7 other tissues See more
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 5

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
106	current	Sscrofa11.1 (GCF_000003025.6)	5	NC_010447.5 (61923057..61936843)
105	previous assembly	Sscrofa10.2 (GCF_000003025.5)	5	NC_010447.4 (64755594..64769466)

Chromosome 5 - NC_010447.5 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
BioProject: PRJNA311523
Publication: PMID 27646534
Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables signaling receptor regulator activity	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: C-type lectin domain family 12 member A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001301669.1 → NP_001288598.1 C-type lectin domain family 12 member A

See identical proteins and their annotated locations for NP_001288598.1

Status: PROVISIONAL

Source sequence(s)

KJ786422

UniProtKB/TrEMBL

A0A076KXE7, A0A8D0YHY6, A0A8D1L425

Related

ENSSSCP00000052073.1, ENSSSCT00000045034.3

Conserved Domains (1) summary

cd03593
Location:126 → 243

CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)