U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CKMT1A creatine kinase, mitochondrial 1A [ Sus scrofa (pig) ]

Gene ID: 100519994, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
CKMT1A
Gene description
creatine kinase, mitochondrial 1A
See related
Ensembl:ENSSSCG00000004703
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Also known as
CKMT1; CKMT1B; Mia-CK; U-MtCK
Expression
Biased expression in mixtures (RPKM 3.8), lung (RPKM 3.7) and 2 other tissues See more
Orthologs
human all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See CKMT1A in Genome Data Viewer
Location:
chromosome: 1
Exon count:
11
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 1 NC_010443.5 (127852533..127859066, complement)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 1 NC_010443.4 (142682191..142688720, complement)

Chromosome 1 - NC_010443.5Genomic Context describing neighboring genes Neighboring gene protein disulfide isomerase family A member 3 Neighboring gene cation channel sperm associated 2 Neighboring gene stereocilin Neighboring gene diphosphoinositol pentakisphosphate kinase 1 Neighboring gene microtubule associated protein 1A Neighboring gene microRNA mir-2366-1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences. Uenishi H, et al. Nucleic Acids Res, 2007 Jan. PMID 17145712, Free PMC Article
  2. PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. Uenishi H, et al. Nucleic Acids Res, 2004 Jan 1. PMID 14681463, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables creatine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphocreatine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
creatine kinase U-type, mitochondrial
Names
Acidic-type mitochondrial creatine kinase
Ubiquitous mitochondrial creatine kinase
creatine kinase, mitochondrial 1B
mitochondrial creatine kinase 1B
NP_001302567.1
XP_003121596.1
XP_005659732.1
XP_005659733.1
XP_013848534.1
XP_020930555.1
XP_020930609.1
XP_020930647.1
XP_020930710.1
XP_020930835.1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001315638.1 → NP_001302567.1  creatine kinase U-type, mitochondrial

    Status: PROVISIONAL

    Source sequence(s)
    EU650786
    UniProtKB/Swiss-Prot
    B2ZF48, Q29577
    UniProtKB/TrEMBL
    A0A8D0IZX3
    Conserved Domains (1) summary
    cd00716
    Location:49 → 406
    creatine_kinase_like; Phosphagen (guanidino) kinases such as creatine kinase and similar enzymes

RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010443.5 Reference Sscrofa11.1 Primary Assembly

    Range
    127852533..127859066 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003121548.3 → XP_003121596.1  creatine kinase U-type, mitochondrial isoform X1

    See identical proteins and their annotated locations for XP_003121596.1

    UniProtKB/TrEMBL
    A0A4X1VA58, A0A8D0IZX3, F1SI77
    Conserved Domains (1) summary
    cd00716
    Location:49 → 406
    creatine_kinase_like; Phosphagen (guanidino) kinases such as creatine kinase and similar enzymes

  2. XM_005659675.3 → XP_005659732.1  creatine kinase U-type, mitochondrial isoform X1

    See identical proteins and their annotated locations for XP_005659732.1

    UniProtKB/TrEMBL
    A0A4X1VA58, A0A8D0IZX3, F1SI77
    Conserved Domains (1) summary
    cd00716
    Location:49 → 406
    creatine_kinase_like; Phosphagen (guanidino) kinases such as creatine kinase and similar enzymes

  3. XM_013993080.1 → XP_013848534.1  creatine kinase U-type, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A4X1VA58, A0A8D0IZX3, F1SI77
    Conserved Domains (1) summary
    cd00716
    Location:49 → 406
    creatine_kinase_like; Phosphagen (guanidino) kinases such as creatine kinase and similar enzymes

  4. XM_021074896.1 → XP_020930555.1  creatine kinase U-type, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A4X1VA58, A0A8D0IZX3, F1SI77
    Conserved Domains (1) summary
    cd00716
    Location:49 → 406
    creatine_kinase_like; Phosphagen (guanidino) kinases such as creatine kinase and similar enzymes

  5. XM_021075176.1 → XP_020930835.1  creatine kinase U-type, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A286ZRC9, A0A4X1VCR4, A0A8D0J076
    Related
    ENSSSCP00000034178.1, ENSSSCT00000038761.2
    Conserved Domains (1) summary
    cl02823
    Location:49 → 332
    phosphagen_kinases; Phosphagen (guanidino) kinases

  6. XM_005659676.3 → XP_005659733.1  creatine kinase U-type, mitochondrial isoform X1

    See identical proteins and their annotated locations for XP_005659733.1

    UniProtKB/TrEMBL
    A0A4X1VA58, A0A8D0IZX3, F1SI77
    Conserved Domains (1) summary
    cd00716
    Location:49 → 406
    creatine_kinase_like; Phosphagen (guanidino) kinases such as creatine kinase and similar enzymes

  7. XM_021074988.1 → XP_020930647.1  creatine kinase U-type, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A4X1VA58, A0A8D0IZX3, F1SI77
    Related
    ENSSSCP00000005068.2, ENSSSCT00000005194.4
    Conserved Domains (1) summary
    cd00716
    Location:49 → 406
    creatine_kinase_like; Phosphagen (guanidino) kinases such as creatine kinase and similar enzymes

  8. XM_021075051.1 → XP_020930710.1  creatine kinase U-type, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A4X1VA58, A0A8D0IZX3, F1SI77
    Conserved Domains (1) summary
    cd00716
    Location:49 → 406
    creatine_kinase_like; Phosphagen (guanidino) kinases such as creatine kinase and similar enzymes

  9. XM_021074950.1 → XP_020930609.1  creatine kinase U-type, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A4X1VA58, A0A8D0IZX3, F1SI77
    Conserved Domains (1) summary
    cd00716
    Location:49 → 406
    creatine_kinase_like; Phosphagen (guanidino) kinases such as creatine kinase and similar enzymes
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q29577.2 GenPept UniProtKB/Swiss-Prot:Q29577

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.