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B3GNT3 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 [ Sus scrofa (pig) ]

Gene ID: 100518473, updated on 17-Aug-2024

Summary

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Official Symbol
B3GNT3provided by VGNC
Official Full Name
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3provided by VGNC
Primary source
VGNC:VGNC:85724
See related
Ensembl:ENSSSCG00000013886
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Ubiquitous expression in lung (RPKM 34.7), spleen (RPKM 19.2) and 8 other tissues See more
Orthologs
human mouse all
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Genomic context

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See B3GNT3 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
5
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 2 NC_010444.4 (59934948..59952861, complement)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 2 NC_010444.3 (59504383..59522285, complement)

Chromosome 2 - NC_010444.4Genomic Context describing neighboring genes Neighboring gene ribosomal protein L18a Neighboring gene Janus kinase 3 Neighboring gene insulin like 3 Neighboring gene FCH and mu domain containing endocytic adaptor 1 Neighboring gene microtubule associated protein 1S

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010444.4 Reference Sscrofa11.1 Primary Assembly

    Range
    59934948..59952861 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003123499.4 → XP_003123547.1  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3

    UniProtKB/TrEMBL
    A0A4X1UD88, A0A8D0USZ1, A0A8D1NRV6, F1S937
    Conserved Domains (1) summary
    cl21608
    Location:123 → 313
    Galactosyl_T; Galactosyltransferase

  2. XM_013987485.2 → XP_013842939.1  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3

    UniProtKB/TrEMBL
    A0A4X1UD88, A0A8D0USZ1, A0A8D1NRV6, F1S937
    Conserved Domains (1) summary
    cl21608
    Location:123 → 313
    Galactosyl_T; Galactosyltransferase

  3. XM_013987484.2 → XP_013842938.1  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3

    UniProtKB/TrEMBL
    A0A4X1UD88, A0A8D0USZ1, A0A8D1NRV6, F1S937
    Conserved Domains (1) summary
    cl21608
    Location:123 → 313
    Galactosyl_T; Galactosyltransferase

  4. XM_013987483.2 → XP_013842937.1  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3

    UniProtKB/TrEMBL
    A0A4X1UD88, A0A8D0USZ1, A0A8D1NRV6, F1S937
    Related
    ENSSSCP00000043086.1, ENSSSCT00000048608.2
    Conserved Domains (1) summary
    cl21608
    Location:123 → 313
    Galactosyl_T; Galactosyltransferase

  5. XM_013987481.2 → XP_013842935.1  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3

    UniProtKB/TrEMBL
    A0A4X1UD88, A0A8D0USZ1, A0A8D1NRV6, F1S937
    Conserved Domains (1) summary
    cl21608
    Location:123 → 313
    Galactosyl_T; Galactosyltransferase

  6. XM_013987482.2 → XP_013842936.1  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3

    UniProtKB/TrEMBL
    A0A4X1UD88, A0A8D0USZ1, A0A8D1NRV6, F1S937
    Conserved Domains (1) summary
    cl21608
    Location:123 → 313
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

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