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TSC22D3 TSC22 domain family member 3 [ Sus scrofa (pig) ]

Gene ID: 100517321, updated on 17-Aug-2024

Summary

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Official Symbol
TSC22D3provided by VGNC
Official Full Name
TSC22 domain family member 3provided by VGNC
Primary source
VGNC:VGNC:94483
See related
Ensembl:ENSSSCG00000030241
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Also known as
DSIP; GILZ; DSIPI
Expression
Ubiquitous expression in lung (RPKM 72.5), subcutaneous adipose (RPKM 64.7) and 8 other tissues See more
Orthologs
human mouse all
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Genomic context

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See TSC22D3 in Genome Data Viewer
Location:
chromosome: X
Exon count:
7
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) X NC_010461.5 (88171325..88233583, complement)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) X NC_010461.4 (102611634..102673219, complement)

Chromosome X - NC_010461.5Genomic Context describing neighboring genes Neighboring gene phosphoribosyl pyrophosphate synthetase 1 Neighboring gene uncharacterized LOC106508240 Neighboring gene nuclear cap-binding protein subunit 2 pseudogene Neighboring gene midline 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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Related articles in PubMed

  1. Solution structure of porcine delta sleep-inducing peptide immunoreactive peptide A homolog of the shortsighted gene product. Seidel G, et al. J Biol Chem, 1997 Dec 5. PMID 9388238
  2. A novel 77-residue peptide from porcine brain contains a leucine-zipper motif and is recognized by an antiserum to delta-sleep-inducing peptide. Sillard R, et al. Eur J Biochem, 1993 Sep 1. PMID 8375381
  3. PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. Uenishi H, et al. Nucleic Acids Res, 2004 Jan 1. PMID 14681463, Free PMC Article
  4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TSC22 domain family protein 3
Names
DIP protein
DSIP-immunoreactive peptide
Glucocorticoid-induced leucine zipper protein
delta sleep inducing peptide immunoreactor
delta-sleep-inducing peptide

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010461.5 Reference Sscrofa11.1 Primary Assembly

    Range
    88171325..88233583 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021080824.1 → XP_020936483.1  TSC22 domain family protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A8D1IT88
    Conserved Domains (1) summary
    pfam01166
    Location:124 → 180
    TSC22; TSC-22/dip/bun family

  2. XM_021080826.1 → XP_020936485.1  TSC22 domain family protein 3 isoform X3

    UniProtKB/TrEMBL
    A0A4X1W5D9, A0A5G2QE60, A0A5S6GML6, A0A8D1DM34
    Related
    ENSSSCP00000021368.3, ENSSSCT00000031772.4
    Conserved Domains (1) summary
    pfam01166
    Location:34 → 90
    TSC22; TSC-22/dip/bun family

  3. XM_021080825.1 → XP_020936484.1  TSC22 domain family protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A287BH25, A0A4X1W576
    Related
    ENSSSCP00000055654.1, ENSSSCT00000062457.3
    Conserved Domains (1) summary
    cd21940
    Location:57 → 134
    ZIP_TSC22D3; leucine zipper domain found in TSC22 domain family protein 3

RNA

  1. XR_002340888.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P80220.1 GenPept UniProtKB/Swiss-Prot:P80220

Gene LinkOut

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