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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference Sscrofa11.1 Primary Assembly
Genomic
-
NC_010448.4 Reference Sscrofa11.1 Primary Assembly
- Range
-
79849691..79958283 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_021095485.1 → XP_020951144.1 basement membrane-specific heparan sulfate proteoglycan core protein isoform X6
- UniProtKB/TrEMBL
-
A0A286ZHV7
- Conserved Domains (18) summary
-
- cd05743
Location:424 → 501
- Ig_Perlecan_like; Immunoglobulin (Ig)-like domain of the human basement membrane heparan sulfate proteoglycan perlecan, also known as HSPG2, and similar domains
- cd05754
Location:1915 → 2000
- Ig_Perlecan_like; Igmmunoglobulin (Ig)-like domain found in Perlecan and similar proteins
- smart00180
Location:1757 → 1805
- EGF_Lam; Laminin-type epidermal growth factor-like domai
- smart00200
Location:80 → 194
- SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
- smart00281
Location:593 → 719
- LamB; Laminin B domain
- smart00409
Location:2789 → 2866
- IG; Immunoglobulin
- smart00410
Location:2596 → 2673
- IG_like; Immunoglobulin like
- cd00054
Location:4303 → 4334
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- cd00055
Location:1161 → 1210
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- cd00110
Location:4361 → 4520
- LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
- cd00112
Location:288 → 322
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- pfam07679
Location:2100 → 2186
- I-set; Immunoglobulin I-set domain
- pfam00053
Location:1279 → 1326
- Laminin_EGF; Laminin EGF domain
- pfam00008
Location:4266 → 4296
- EGF; EGF-like domain
- pfam00052
Location:993 → 1127
- Laminin_B; Laminin B (Domain IV)
- pfam13927
Location:3364 → 3433
- Ig_3; Immunoglobulin domain
- cl11960
Location:3569 → 3635
- Ig; Immunoglobulin domain
- cl28434
Location:3451 → 3534
- I-set; Immunoglobulin I-set domain
-
XM_021095484.1 → XP_020951143.1 basement membrane-specific heparan sulfate proteoglycan core protein isoform X5
- UniProtKB/TrEMBL
-
A0A286ZHV7
- Conserved Domains (18) summary
-
- cd05743
Location:424 → 501
- Ig_Perlecan_like; Immunoglobulin (Ig)-like domain of the human basement membrane heparan sulfate proteoglycan perlecan, also known as HSPG2, and similar domains
- cd05754
Location:1922 → 2007
- Ig_Perlecan_like; Igmmunoglobulin (Ig)-like domain found in Perlecan and similar proteins
- smart00180
Location:1764 → 1812
- EGF_Lam; Laminin-type epidermal growth factor-like domai
- smart00200
Location:80 → 194
- SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
- smart00281
Location:593 → 719
- LamB; Laminin B domain
- smart00409
Location:1834 → 1914
- IG; Immunoglobulin
- smart00410
Location:2796 → 2873
- IG_like; Immunoglobulin like
- cd00054
Location:4310 → 4341
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- cd00055
Location:1168 → 1217
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- cd00110
Location:4368 → 4527
- LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
- cd00112
Location:288 → 322
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- pfam07679
Location:2107 → 2193
- I-set; Immunoglobulin I-set domain
- pfam00053
Location:1286 → 1333
- Laminin_EGF; Laminin EGF domain
- pfam00008
Location:4273 → 4303
- EGF; EGF-like domain
- pfam00052
Location:1000 → 1134
- Laminin_B; Laminin B (Domain IV)
- pfam13927
Location:3371 → 3440
- Ig_3; Immunoglobulin domain
- cl11960
Location:3576 → 3642
- Ig; Immunoglobulin domain
- cl28434
Location:3458 → 3541
- I-set; Immunoglobulin I-set domain
-
XM_021095483.1 → XP_020951142.1 basement membrane-specific heparan sulfate proteoglycan core protein isoform X4
- UniProtKB/TrEMBL
-
A0A286ZHV7
- Conserved Domains (18) summary
-
- cd05743
Location:441 → 518
- Ig_Perlecan_like; Immunoglobulin (Ig)-like domain of the human basement membrane heparan sulfate proteoglycan perlecan, also known as HSPG2, and similar domains
- cd05754
Location:1932 → 2017
- Ig_Perlecan_like; Igmmunoglobulin (Ig)-like domain found in Perlecan and similar proteins
- smart00180
Location:1774 → 1822
- EGF_Lam; Laminin-type epidermal growth factor-like domai
- smart00200
Location:80 → 193
- SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
- smart00281
Location:610 → 736
- LamB; Laminin B domain
- smart00409
Location:2806 → 2883
- IG; Immunoglobulin
- smart00410
Location:2613 → 2690
- IG_like; Immunoglobulin like
- cd00054
Location:4320 → 4351
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- cd00055
Location:1178 → 1227
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- cd00110
Location:4378 → 4537
- LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
- cd00112
Location:305 → 339
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- pfam07679
Location:2117 → 2203
- I-set; Immunoglobulin I-set domain
- pfam00053
Location:1296 → 1343
- Laminin_EGF; Laminin EGF domain
- pfam00008
Location:4283 → 4313
- EGF; EGF-like domain
- pfam00052
Location:1010 → 1144
- Laminin_B; Laminin B (Domain IV)
- pfam13927
Location:3381 → 3450
- Ig_3; Immunoglobulin domain
- cl11960
Location:3586 → 3652
- Ig; Immunoglobulin domain
- cl28434
Location:3468 → 3551
- I-set; Immunoglobulin I-set domain
-
XM_021095486.1 → XP_020951145.1 basement membrane-specific heparan sulfate proteoglycan core protein isoform X7
- UniProtKB/TrEMBL
-
A0A286ZHV7
- Conserved Domains (18) summary
-
- cd05743
Location:441 → 518
- Ig_Perlecan_like; Immunoglobulin (Ig)-like domain of the human basement membrane heparan sulfate proteoglycan perlecan, also known as HSPG2, and similar domains
- cd05754
Location:1905 → 1990
- Ig_Perlecan_like; Igmmunoglobulin (Ig)-like domain found in Perlecan and similar proteins
- smart00180
Location:1747 → 1795
- EGF_Lam; Laminin-type epidermal growth factor-like domai
- smart00200
Location:80 → 193
- SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
- smart00281
Location:610 → 736
- LamB; Laminin B domain
- smart00409
Location:2586 → 2663
- IG; Immunoglobulin
- smart00410
Location:2779 → 2856
- IG_like; Immunoglobulin like
- cd00054
Location:4293 → 4324
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- cd00055
Location:1185 → 1234
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- cd00110
Location:4351 → 4510
- LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
- cd00112
Location:305 → 339
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- pfam07679
Location:2090 → 2176
- I-set; Immunoglobulin I-set domain
- pfam00053
Location:1303 → 1350
- Laminin_EGF; Laminin EGF domain
- pfam00008
Location:4256 → 4286
- EGF; EGF-like domain
- pfam00052
Location:1017 → 1151
- Laminin_B; Laminin B (Domain IV)
- pfam13927
Location:3354 → 3423
- Ig_3; Immunoglobulin domain
- cl11960
Location:3559 → 3625
- Ig; Immunoglobulin domain
- cl28434
Location:3441 → 3524
- I-set; Immunoglobulin I-set domain
-
XM_021095481.1 → XP_020951140.1 basement membrane-specific heparan sulfate proteoglycan core protein isoform X2
- UniProtKB/TrEMBL
-
A0A286ZHV7
- Conserved Domains (18) summary
-
- cd05743
Location:441 → 518
- Ig_Perlecan_like; Immunoglobulin (Ig)-like domain of the human basement membrane heparan sulfate proteoglycan perlecan, also known as HSPG2, and similar domains
- cd05754
Location:1938 → 2023
- Ig_Perlecan_like; Igmmunoglobulin (Ig)-like domain found in Perlecan and similar proteins
- smart00180
Location:1781 → 1829
- EGF_Lam; Laminin-type epidermal growth factor-like domai
- smart00200
Location:80 → 193
- SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
- smart00281
Location:610 → 736
- LamB; Laminin B domain
- smart00409
Location:2619 → 2696
- IG; Immunoglobulin
- smart00410
Location:2812 → 2889
- IG_like; Immunoglobulin like
- cd00054
Location:4326 → 4357
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- cd00055
Location:1185 → 1234
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- cd00110
Location:4384 → 4543
- LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
- cd00112
Location:305 → 339
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- pfam07679
Location:2123 → 2209
- I-set; Immunoglobulin I-set domain
- pfam00053
Location:1303 → 1350
- Laminin_EGF; Laminin EGF domain
- pfam00008
Location:4289 → 4319
- EGF; EGF-like domain
- pfam00052
Location:1017 → 1151
- Laminin_B; Laminin B (Domain IV)
- pfam13927
Location:3387 → 3456
- Ig_3; Immunoglobulin domain
- cl11960
Location:3592 → 3658
- Ig; Immunoglobulin domain
- cl28434
Location:3474 → 3557
- I-set; Immunoglobulin I-set domain
-
XM_021095494.1 → XP_020951153.1 basement membrane-specific heparan sulfate proteoglycan core protein isoform X15
- UniProtKB/TrEMBL
-
A0A8D1S8S8
- Conserved Domains (18) summary
-
- cd05743
Location:441 → 518
- Ig_Perlecan_like; Immunoglobulin (Ig)-like domain of the human basement membrane heparan sulfate proteoglycan perlecan, also known as HSPG2, and similar domains
- cd05754
Location:1939 → 2024
- Ig_Perlecan_like; Igmmunoglobulin (Ig)-like domain found in Perlecan and similar proteins
- smart00180
Location:1781 → 1829
- EGF_Lam; Laminin-type epidermal growth factor-like domai
- smart00200
Location:80 → 193
- SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
- smart00281
Location:610 → 736
- LamB; Laminin B domain
- smart00409
Location:2331 → 2408
- IG; Immunoglobulin
- smart00410
Location:2524 → 2601
- IG_like; Immunoglobulin like
- cd00054
Location:4038 → 4069
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- cd00055
Location:1185 → 1234
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- cd00110
Location:4096 → 4255
- LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
- cd00112
Location:305 → 339
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- pfam07679
Location:2124 → 2210
- I-set; Immunoglobulin I-set domain
- pfam00053
Location:1303 → 1350
- Laminin_EGF; Laminin EGF domain
- pfam00008
Location:4001 → 4031
- EGF; EGF-like domain
- pfam00052
Location:1017 → 1151
- Laminin_B; Laminin B (Domain IV)
- pfam13927
Location:3099 → 3168
- Ig_3; Immunoglobulin domain
- cl11960
Location:3304 → 3370
- Ig; Immunoglobulin domain
- cl28434
Location:3186 → 3269
- I-set; Immunoglobulin I-set domain
-
XM_021095488.1 → XP_020951147.1 basement membrane-specific heparan sulfate proteoglycan core protein isoform X9
- UniProtKB/TrEMBL
-
A0A8D1S375
- Conserved Domains (18) summary
-
- cd05743
Location:441 → 518
- Ig_Perlecan_like; Immunoglobulin (Ig)-like domain of the human basement membrane heparan sulfate proteoglycan perlecan, also known as HSPG2, and similar domains
- cd05754
Location:1939 → 2024
- Ig_Perlecan_like; Igmmunoglobulin (Ig)-like domain found in Perlecan and similar proteins
- smart00180
Location:1781 → 1829
- EGF_Lam; Laminin-type epidermal growth factor-like domai
- smart00200
Location:80 → 193
- SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
- smart00281
Location:610 → 736
- LamB; Laminin B domain
- smart00409
Location:2715 → 2792
- IG; Immunoglobulin
- smart00410
Location:2226 → 2303
- IG_like; Immunoglobulin like
- cd00054
Location:4229 → 4260
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- cd00055
Location:1185 → 1234
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- cd00110
Location:4287 → 4446
- LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
- cd00112
Location:305 → 339
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- pfam07679
Location:2124 → 2210
- I-set; Immunoglobulin I-set domain
- pfam00053
Location:1303 → 1350
- Laminin_EGF; Laminin EGF domain
- pfam00008
Location:4192 → 4222
- EGF; EGF-like domain
- pfam00052
Location:1017 → 1151
- Laminin_B; Laminin B (Domain IV)
- pfam13927
Location:3290 → 3359
- Ig_3; Immunoglobulin domain
- cl11960
Location:3495 → 3561
- Ig; Immunoglobulin domain
- cl28434
Location:3377 → 3460
- I-set; Immunoglobulin I-set domain
-
XM_021095487.1 → XP_020951146.1 basement membrane-specific heparan sulfate proteoglycan core protein isoform X8
- UniProtKB/TrEMBL
-
A0A286ZHV7
- Conserved Domains (18) summary
-
- cd05743
Location:441 → 518
- Ig_Perlecan_like; Immunoglobulin (Ig)-like domain of the human basement membrane heparan sulfate proteoglycan perlecan, also known as HSPG2, and similar domains
- cd05754
Location:1939 → 2024
- Ig_Perlecan_like; Igmmunoglobulin (Ig)-like domain found in Perlecan and similar proteins
- smart00180
Location:1781 → 1829
- EGF_Lam; Laminin-type epidermal growth factor-like domai
- smart00200
Location:80 → 193
- SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
- smart00281
Location:610 → 736
- LamB; Laminin B domain
- smart00409
Location:2717 → 2794
- IG; Immunoglobulin
- smart00410
Location:2524 → 2601
- IG_like; Immunoglobulin like
- cd00054
Location:4231 → 4262
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- cd00055
Location:1185 → 1234
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- cd00110
Location:4289 → 4448
- LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
- cd00112
Location:305 → 339
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- pfam07679
Location:2124 → 2210
- I-set; Immunoglobulin I-set domain
- pfam00053
Location:1303 → 1350
- Laminin_EGF; Laminin EGF domain
- pfam00008
Location:4194 → 4224
- EGF; EGF-like domain
- pfam00052
Location:1017 → 1151
- Laminin_B; Laminin B (Domain IV)
- pfam13927
Location:3292 → 3361
- Ig_3; Immunoglobulin domain
- cl11960
Location:3497 → 3563
- Ig; Immunoglobulin domain
- cl28434
Location:3379 → 3462
- I-set; Immunoglobulin I-set domain
-
XM_021095493.1 → XP_020951152.1 basement membrane-specific heparan sulfate proteoglycan core protein isoform X14
- UniProtKB/TrEMBL
- A0A286ZHV7, A0A480WWH8, A0A481BCW8
- Conserved Domains (18) summary
-
- cd05743
Location:441 → 518
- Ig_Perlecan_like; Immunoglobulin (Ig)-like domain of the human basement membrane heparan sulfate proteoglycan perlecan, also known as HSPG2, and similar domains
- cd05754
Location:1939 → 2024
- Ig_Perlecan_like; Igmmunoglobulin (Ig)-like domain found in Perlecan and similar proteins
- smart00180
Location:1781 → 1829
- EGF_Lam; Laminin-type epidermal growth factor-like domai
- smart00200
Location:80 → 193
- SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
- smart00281
Location:610 → 736
- LamB; Laminin B domain
- smart00409
Location:2620 → 2697
- IG; Immunoglobulin
- smart00410
Location:2331 → 2408
- IG_like; Immunoglobulin like
- cd00054
Location:4124 → 4155
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- cd00055
Location:1185 → 1234
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- cd00110
Location:4182 → 4341
- LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
- cd00112
Location:305 → 339
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- pfam07679
Location:2807 → 2890
- I-set; Immunoglobulin I-set domain
- pfam00053
Location:1303 → 1350
- Laminin_EGF; Laminin EGF domain
- pfam00008
Location:4087 → 4117
- EGF; EGF-like domain
- pfam00052
Location:1017 → 1151
- Laminin_B; Laminin B (Domain IV)
- pfam13927
Location:3191 → 3260
- Ig_3; Immunoglobulin domain
- cl11960
Location:3396 → 3462
- Ig; Immunoglobulin domain
- cl28434
Location:3278 → 3361
- I-set; Immunoglobulin I-set domain
-
XM_021095492.1 → XP_020951151.1 basement membrane-specific heparan sulfate proteoglycan core protein isoform X13
- UniProtKB/TrEMBL
- A0A286ZHV7, A0A480WWH8, A0A481BCW8
- Conserved Domains (18) summary
-
- cd05743
Location:441 → 518
- Ig_Perlecan_like; Immunoglobulin (Ig)-like domain of the human basement membrane heparan sulfate proteoglycan perlecan, also known as HSPG2, and similar domains
- cd05754
Location:1939 → 2024
- Ig_Perlecan_like; Igmmunoglobulin (Ig)-like domain found in Perlecan and similar proteins
- smart00180
Location:1781 → 1829
- EGF_Lam; Laminin-type epidermal growth factor-like domai
- smart00200
Location:80 → 193
- SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
- smart00281
Location:610 → 736
- LamB; Laminin B domain
- smart00409
Location:2620 → 2697
- IG; Immunoglobulin
- smart00410
Location:2331 → 2408
- IG_like; Immunoglobulin like
- cd00054
Location:4130 → 4161
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- cd00055
Location:1185 → 1234
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- cd00110
Location:4188 → 4347
- LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
- cd00112
Location:305 → 339
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- pfam07679
Location:2807 → 2890
- I-set; Immunoglobulin I-set domain
- pfam00053
Location:1303 → 1350
- Laminin_EGF; Laminin EGF domain
- pfam00008
Location:4093 → 4123
- EGF; EGF-like domain
- pfam00052
Location:1017 → 1151
- Laminin_B; Laminin B (Domain IV)
- pfam13927
Location:3191 → 3260
- Ig_3; Immunoglobulin domain
- cl11960
Location:3396 → 3462
- Ig; Immunoglobulin domain
- cl28434
Location:3278 → 3361
- I-set; Immunoglobulin I-set domain
-
XM_021095482.1 → XP_020951141.1 basement membrane-specific heparan sulfate proteoglycan core protein isoform X3
- UniProtKB/TrEMBL
-
A0A286ZHV7
- Conserved Domains (18) summary
-
- cd05743
Location:441 → 518
- Ig_Perlecan_like; Immunoglobulin (Ig)-like domain of the human basement membrane heparan sulfate proteoglycan perlecan, also known as HSPG2, and similar domains
- cd05754
Location:1939 → 2024
- Ig_Perlecan_like; Igmmunoglobulin (Ig)-like domain found in Perlecan and similar proteins
- smart00180
Location:1781 → 1829
- EGF_Lam; Laminin-type epidermal growth factor-like domai
- smart00200
Location:80 → 193
- SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
- smart00281
Location:610 → 736
- LamB; Laminin B domain
- smart00409
Location:2620 → 2697
- IG; Immunoglobulin
- smart00410
Location:2813 → 2890
- IG_like; Immunoglobulin like
- cd00054
Location:4321 → 4352
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- cd00055
Location:1185 → 1234
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- cd00110
Location:4379 → 4538
- LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
- cd00112
Location:305 → 339
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- pfam07679
Location:2124 → 2210
- I-set; Immunoglobulin I-set domain
- pfam00053
Location:1303 → 1350
- Laminin_EGF; Laminin EGF domain
- pfam00008
Location:4284 → 4314
- EGF; EGF-like domain
- pfam00052
Location:1017 → 1151
- Laminin_B; Laminin B (Domain IV)
- pfam13927
Location:3388 → 3457
- Ig_3; Immunoglobulin domain
- cl11960
Location:3593 → 3659
- Ig; Immunoglobulin domain
- cl28434
Location:3475 → 3558
- I-set; Immunoglobulin I-set domain
-
XM_021095480.1 → XP_020951139.1 basement membrane-specific heparan sulfate proteoglycan core protein isoform X1
- UniProtKB/TrEMBL
-
A0A286ZHV7
- Conserved Domains (18) summary
-
- cd05743
Location:441 → 518
- Ig_Perlecan_like; Immunoglobulin (Ig)-like domain of the human basement membrane heparan sulfate proteoglycan perlecan, also known as HSPG2, and similar domains
- cd05754
Location:1939 → 2024
- Ig_Perlecan_like; Igmmunoglobulin (Ig)-like domain found in Perlecan and similar proteins
- smart00180
Location:1781 → 1829
- EGF_Lam; Laminin-type epidermal growth factor-like domai
- smart00200
Location:80 → 193
- SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
- smart00281
Location:610 → 736
- LamB; Laminin B domain
- smart00409
Location:2620 → 2697
- IG; Immunoglobulin
- smart00410
Location:2813 → 2890
- IG_like; Immunoglobulin like
- cd00054
Location:4327 → 4358
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- cd00055
Location:1185 → 1234
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- cd00110
Location:4385 → 4544
- LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
- cd00112
Location:305 → 339
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- pfam07679
Location:2124 → 2210
- I-set; Immunoglobulin I-set domain
- pfam00053
Location:1303 → 1350
- Laminin_EGF; Laminin EGF domain
- pfam00008
Location:4290 → 4320
- EGF; EGF-like domain
- pfam00052
Location:1017 → 1151
- Laminin_B; Laminin B (Domain IV)
- pfam13927
Location:3388 → 3457
- Ig_3; Immunoglobulin domain
- cl11960
Location:3593 → 3659
- Ig; Immunoglobulin domain
- cl28434
Location:3475 → 3558
- I-set; Immunoglobulin I-set domain
-
XM_021095496.1 → XP_020951155.1 basement membrane-specific heparan sulfate proteoglycan core protein isoform X17
- UniProtKB/TrEMBL
-
A0A286ZHV7
- Conserved Domains (18) summary
-
- cd05743
Location:424 → 501
- Ig_Perlecan_like; Immunoglobulin (Ig)-like domain of the human basement membrane heparan sulfate proteoglycan perlecan, also known as HSPG2, and similar domains
- cd05754
Location:1774 → 1859
- Ig_Perlecan_like; Igmmunoglobulin (Ig)-like domain found in Perlecan and similar proteins
- smart00180
Location:1617 → 1665
- EGF_Lam; Laminin-type epidermal growth factor-like domai
- smart00200
Location:80 → 194
- SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
- smart00281
Location:1395 → 1520
- LamB; Laminin B domain
- smart00409
Location:2648 → 2725
- IG; Immunoglobulin
- smart00410
Location:2846 → 2922
- IG_like; Immunoglobulin like
- cd00054
Location:4156 → 4187
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- cd00055
Location:1161 → 1210
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- cd00110
Location:4214 → 4373
- LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
- cd00112
Location:288 → 322
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- pfam07679
Location:1959 → 2045
- I-set; Immunoglobulin I-set domain
- pfam00053
Location:1279 → 1326
- Laminin_EGF; Laminin EGF domain
- pfam00008
Location:4119 → 4149
- EGF; EGF-like domain
- pfam00052
Location:993 → 1127
- Laminin_B; Laminin B (Domain IV)
- pfam13927
Location:3223 → 3292
- Ig_3; Immunoglobulin domain
- cl11960
Location:3428 → 3494
- Ig; Immunoglobulin domain
- cl28434
Location:3310 → 3393
- I-set; Immunoglobulin I-set domain
-
XM_021095495.1 → XP_020951154.1 basement membrane-specific heparan sulfate proteoglycan core protein isoform X16
- UniProtKB/TrEMBL
-
A0A286ZHV7
- Related
- ENSSSCP00000031125.2, ENSSSCT00000064564.3
- Conserved Domains (18) summary
-
- cd05743
Location:424 → 501
- Ig_Perlecan_like; Immunoglobulin (Ig)-like domain of the human basement membrane heparan sulfate proteoglycan perlecan, also known as HSPG2, and similar domains
- cd05754
Location:1775 → 1860
- Ig_Perlecan_like; Igmmunoglobulin (Ig)-like domain found in Perlecan and similar proteins
- smart00180
Location:1617 → 1665
- EGF_Lam; Laminin-type epidermal growth factor-like domai
- smart00200
Location:80 → 194
- SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
- smart00281
Location:1395 → 1520
- LamB; Laminin B domain
- smart00409
Location:2649 → 2726
- IG; Immunoglobulin
- smart00410
Location:2847 → 2923
- IG_like; Immunoglobulin like
- cd00054
Location:4157 → 4188
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- cd00055
Location:1161 → 1210
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- cd00110
Location:4215 → 4374
- LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
- cd00112
Location:288 → 322
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- pfam07679
Location:1960 → 2046
- I-set; Immunoglobulin I-set domain
- pfam00053
Location:1279 → 1326
- Laminin_EGF; Laminin EGF domain
- pfam00008
Location:4120 → 4150
- EGF; EGF-like domain
- pfam00052
Location:993 → 1127
- Laminin_B; Laminin B (Domain IV)
- pfam13927
Location:3224 → 3293
- Ig_3; Immunoglobulin domain
- cl11960
Location:3429 → 3495
- Ig; Immunoglobulin domain
- cl28434
Location:3311 → 3394
- I-set; Immunoglobulin I-set domain
-
XM_021095491.1 → XP_020951150.1 basement membrane-specific heparan sulfate proteoglycan core protein isoform X12
- UniProtKB/TrEMBL
-
A0A286ZHV7
- Conserved Domains (18) summary
-
- cd05743
Location:424 → 501
- Ig_Perlecan_like; Immunoglobulin (Ig)-like domain of the human basement membrane heparan sulfate proteoglycan perlecan, also known as HSPG2, and similar domains
- cd05754
Location:1775 → 1860
- Ig_Perlecan_like; Igmmunoglobulin (Ig)-like domain found in Perlecan and similar proteins
- smart00180
Location:1617 → 1665
- EGF_Lam; Laminin-type epidermal growth factor-like domai
- smart00200
Location:80 → 194
- SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
- smart00281
Location:1395 → 1520
- LamB; Laminin B domain
- smart00409
Location:2456 → 2533
- IG; Immunoglobulin
- smart00410
Location:2649 → 2726
- IG_like; Immunoglobulin like
- cd00054
Location:4163 → 4194
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- cd00055
Location:1161 → 1210
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- cd00110
Location:4221 → 4380
- LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
- cd00112
Location:288 → 322
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- pfam07679
Location:1960 → 2046
- I-set; Immunoglobulin I-set domain
- pfam00053
Location:1279 → 1326
- Laminin_EGF; Laminin EGF domain
- pfam00008
Location:4126 → 4156
- EGF; EGF-like domain
- pfam00052
Location:993 → 1127
- Laminin_B; Laminin B (Domain IV)
- pfam13927
Location:3224 → 3293
- Ig_3; Immunoglobulin domain
- cl11960
Location:3429 → 3495
- Ig; Immunoglobulin domain
- cl28434
Location:3311 → 3394
- I-set; Immunoglobulin I-set domain
-
XM_021095490.1 → XP_020951149.1 basement membrane-specific heparan sulfate proteoglycan core protein isoform X11
- UniProtKB/TrEMBL
-
A0A286ZHV7
- Conserved Domains (18) summary
-
- cd05743
Location:441 → 518
- Ig_Perlecan_like; Immunoglobulin (Ig)-like domain of the human basement membrane heparan sulfate proteoglycan perlecan, also known as HSPG2, and similar domains
- cd05754
Location:1798 → 1883
- Ig_Perlecan_like; Igmmunoglobulin (Ig)-like domain found in Perlecan and similar proteins
- smart00180
Location:1641 → 1689
- EGF_Lam; Laminin-type epidermal growth factor-like domai
- smart00200
Location:80 → 193
- SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
- smart00281
Location:1419 → 1544
- LamB; Laminin B domain
- smart00409
Location:2085 → 2162
- IG; Immunoglobulin
- smart00410
Location:2672 → 2749
- IG_like; Immunoglobulin like
- cd00054
Location:4186 → 4217
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- cd00055
Location:1185 → 1234
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- cd00110
Location:4244 → 4403
- LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
- cd00112
Location:305 → 339
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- pfam07679
Location:1983 → 2069
- I-set; Immunoglobulin I-set domain
- pfam00053
Location:1303 → 1350
- Laminin_EGF; Laminin EGF domain
- pfam00008
Location:4149 → 4179
- EGF; EGF-like domain
- pfam00052
Location:1017 → 1151
- Laminin_B; Laminin B (Domain IV)
- pfam13927
Location:3247 → 3316
- Ig_3; Immunoglobulin domain
- cl11960
Location:3452 → 3518
- Ig; Immunoglobulin domain
- cl28434
Location:3334 → 3417
- I-set; Immunoglobulin I-set domain
-
XM_021095489.1 → XP_020951148.1 basement membrane-specific heparan sulfate proteoglycan core protein isoform X10
- UniProtKB/TrEMBL
-
A0A286ZHV7
- Conserved Domains (18) summary
-
- cd05743
Location:441 → 518
- Ig_Perlecan_like; Immunoglobulin (Ig)-like domain of the human basement membrane heparan sulfate proteoglycan perlecan, also known as HSPG2, and similar domains
- cd05754
Location:1799 → 1884
- Ig_Perlecan_like; Igmmunoglobulin (Ig)-like domain found in Perlecan and similar proteins
- smart00180
Location:1641 → 1689
- EGF_Lam; Laminin-type epidermal growth factor-like domai
- smart00200
Location:80 → 193
- SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
- smart00281
Location:1419 → 1544
- LamB; Laminin B domain
- smart00409
Location:2086 → 2163
- IG; Immunoglobulin
- smart00410
Location:2673 → 2750
- IG_like; Immunoglobulin like
- cd00054
Location:4187 → 4218
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- cd00055
Location:1185 → 1234
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- cd00110
Location:4245 → 4404
- LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
- cd00112
Location:305 → 339
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- pfam07679
Location:1984 → 2070
- I-set; Immunoglobulin I-set domain
- pfam00053
Location:1303 → 1350
- Laminin_EGF; Laminin EGF domain
- pfam00008
Location:4150 → 4180
- EGF; EGF-like domain
- pfam00052
Location:1017 → 1151
- Laminin_B; Laminin B (Domain IV)
- pfam13927
Location:3248 → 3317
- Ig_3; Immunoglobulin domain
- cl11960
Location:3453 → 3519
- Ig; Immunoglobulin domain
- cl28434
Location:3335 → 3418
- I-set; Immunoglobulin I-set domain