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ACSBG2 acyl-CoA synthetase bubblegum family member 2 [ Sus scrofa (pig) ]

Gene ID: 100516418, updated on 17-Aug-2024

Summary

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Official Symbol
ACSBG2provided by VGNC
Official Full Name
acyl-CoA synthetase bubblegum family member 2provided by VGNC
Primary source
VGNC:VGNC:96784
See related
Ensembl:ENSSSCG00000013536
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Low expression observed in reference dataset See more
Orthologs
human mouse all
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Genomic context

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See ACSBG2 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
13
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 2 NC_010444.4 (72879252..72910311, complement)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 2 NC_010444.3 (73441581..73485239, complement)

Chromosome 2 - NC_010444.4Genomic Context describing neighboring genes Neighboring gene alkaline ceramidase 1 Neighboring gene caseinolytic mitochondrial matrix peptidase proteolytic subunit Neighboring gene uncharacterized LOC110259353 Neighboring gene MLLT1 super elongation complex subunit Neighboring gene regulatory factor X2 Neighboring gene RAN binding protein 3 Neighboring gene calcyphosine

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables long-chain fatty acid-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
long-chain-fatty-acid--CoA ligase ACSBG2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010444.4 Reference Sscrofa11.1 Primary Assembly

    Range
    72879252..72910311 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021083994.1 → XP_020939653.1  long-chain-fatty-acid--CoA ligase ACSBG2

    UniProtKB/TrEMBL
    A0A287AJ16, A0A4X1VSP4
    Related
    ENSSSCP00000044003.2, ENSSSCT00000046661.3
    Conserved Domains (1) summary
    cd05933
    Location:58 → 655
    ACSBG_like; Bubblegum-like very long-chain fatty acid CoA synthetase (VL-FACS)
Nucleotide Protein
Heading Accession and Version

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