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HIBCH 3-hydroxyisobutyryl-CoA hydrolase [ Sus scrofa (pig) ]

Gene ID: 100514687, updated on 17-Aug-2024

Summary

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Official Symbol
HIBCHprovided by VGNC
Official Full Name
3-hydroxyisobutyryl-CoA hydrolaseprovided by VGNC
Primary source
VGNC:VGNC:96343
See related
Ensembl:ENSSSCG00000016049
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Ubiquitous expression in heart (RPKM 18.5), kidney (RPKM 15.9) and 8 other tissues See more
Orthologs
human mouse all
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Genomic context

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See HIBCH in Genome Data Viewer
Location:
chromosome: 15
Exon count:
16
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 15 NC_010457.5 (94795744..94941362, complement)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 15 NC_010457.4 (105964875..105973529, complement)

Chromosome 15 - NC_010457.5Genomic Context describing neighboring genes Neighboring gene cytochrome c pseudogene Neighboring gene chromosome 15 C2orf88 homolog Neighboring gene myostatin Neighboring gene inositol polyphosphate-1-phosphatase Neighboring gene uncharacterized LOC100515242 Neighboring gene major facilitator superfamily domain containing 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3-hydroxyisobutyryl-CoA hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in valine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
3-hydroxyisobutyryl-CoA hydrolase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010457.5 Reference Sscrofa11.1 Primary Assembly

    Range
    94795744..94941362 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021076263.1 → XP_020931922.1  3-hydroxyisobutyryl-CoA hydrolase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A4X1TIY1, A0A5G2QLF4
    Related
    ENSSSCP00000062904.1, ENSSSCT00000089886.2
    Conserved Domains (1) summary
    pfam16113
    Location:47 → 375
    ECH_2; Enoyl-CoA hydratase/isomerase

  2. XM_021076264.1 → XP_020931923.1  3-hydroxyisobutyryl-CoA hydrolase, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A4X1TI64
    Related
    ENSSSCP00000067764.1, ENSSSCT00000067405.2
    Conserved Domains (1) summary
    pfam16113
    Location:22 → 350
    ECH_2; Enoyl-CoA hydratase/isomerase

  3. XM_021076265.1 → XP_020931924.1  3-hydroxyisobutyryl-CoA hydrolase, mitochondrial isoform X3

    UniProtKB/TrEMBL
    A0A4X1TI97
    Related
    ENSSSCP00000053440.3, ENSSSCT00000049732.3
    Conserved Domains (1) summary
    pfam16113
    Location:47 → 338
    ECH_2; Enoyl-CoA hydratase/isomerase
Nucleotide Protein
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