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SLC35F6 solute carrier family 35 member F6 [ Sus scrofa (pig) ]

Gene ID: 100513653, updated on 8-Mar-2024

Summary

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Official Symbol
SLC35F6provided by VGNC
Official Full Name
solute carrier family 35 member F6provided by VGNC
Primary source
VGNC:VGNC:93085
See related
Ensembl:ENSSSCG00000008562
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Ubiquitous expression in lung (RPKM 19.0), kidney (RPKM 18.3) and 8 other tissues See more
Orthologs
human mouse all
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Genomic context

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See SLC35F6 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
7
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 3 NC_010445.4 (112280654..112296874, complement)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 3 NC_010445.3 (119279988..119296212, complement)

Chromosome 3 - NC_010445.4Genomic Context describing neighboring genes Neighboring gene dihydropyrimidinase like 5 Neighboring gene centromere protein A Neighboring gene uncharacterized LOC106509869 Neighboring gene uncharacterized LOC102168019 Neighboring gene potassium two pore domain channel subfamily K member 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
solute carrier family 35 member F6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010445.4 Reference Sscrofa11.1 Primary Assembly

    Range
    112280654..112296874 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003125327.4 → XP_003125375.1  solute carrier family 35 member F6 isoform X1

    UniProtKB/TrEMBL
    A0A480U7I1, A0A4X1TP79, A0A8D1GJ74, F1SDQ0
    Related
    ENSSSCP00000009127.2, ENSSSCT00000009367.5
    Conserved Domains (1) summary
    cl23754
    Location:102 → 333
    EamA; EamA-like transporter family

  2. XM_021087725.1 → XP_020943384.1  solute carrier family 35 member F6 isoform X2

    UniProtKB/TrEMBL
    A0A8D1B7D2
    Conserved Domains (1) summary
    pfam06027
    Location:42 → 169
    SLC35F; Solute carrier family 35
Nucleotide Protein
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