ADH5 alcohol dehydrogenase 5 (class III), chi polypeptide [Sus scrofa (pig)] - Gene

Summary

Gene symbol: ADH5
Gene description: alcohol dehydrogenase 5 (class III), chi polypeptide
See related: Ensembl:ENSSSCG00000009185
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Sus scrofa
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression: Ubiquitous expression in kidney (RPKM 131.4), ovary (RPKM 108.2) and 8 other tissues See more
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 8

Exon count:: 9

Annotation release	Status	Assembly	Chr	Location
106	current	Sscrofa11.1 (GCF_000003025.6)	8	NC_010450.4 (121266794..121282313)
105	previous assembly	Sscrofa10.2 (GCF_000003025.5)	8	NC_010450.3 (130451304..130466904)

Chromosome 8 - NC_010450.4 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
BioProject: PRJNA311523
Publication: PMID 27646534
Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables S-(hydroxymethyl)glutathione dehydrogenase [NAD(P)+] activity	IEA Inferred from Electronic Annotation more info	PubMed
enables zinc ion binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in formaldehyde catabolic process	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in cytosol	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: alcohol dehydrogenase class-3

NP_001231762.1

EC 1.1.1.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001244833.1 → NP_001231762.1 alcohol dehydrogenase class-3

Status: VALIDATED

Source sequence(s)

AK235370

UniProtKB/TrEMBL

A0A4X1UEX6, A0A8D0PYK8, A0A8D1QD02, F1S0C1

Related

ENSSSCP00000009795.3, ENSSSCT00000010058.5

Conserved Domains (2) summary

cd08300
Location:17 → 384

alcohol_DH_class_III; class III alcohol dehydrogenases

COG1062
Location:17 → 385

FrmA; Zn-dependent alcohol dehydrogenase [General function prediction only]