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B3GNTL1 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1 [ Sus scrofa (pig) ]

Gene ID: 100511953, updated on 17-Aug-2024

Summary

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Official Symbol
B3GNTL1provided by VGNC
Official Full Name
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1provided by VGNC
Primary source
VGNC:VGNC:85729
See related
Ensembl:ENSSSCG00000027229
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Ubiquitous expression in ovary (RPKM 6.4), kidney (RPKM 3.1) and 8 other tissues See more
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 12
Exon count:
18
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 12 NC_010454.4 (259880..326420)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 12 NC_010454.3 (411336..478735, complement)

Chromosome 12 - NC_010454.4Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106505369 Neighboring gene meteorin like, glial cell differentiation regulator Neighboring gene uncharacterized LOC110255919 Neighboring gene tubulin folding cofactor D Neighboring gene zinc finger protein 750 Neighboring gene fructosamine 3 kinase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010454.4 Reference Sscrofa11.1 Primary Assembly

    Range
    259880..326420
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003131147.5 → XP_003131195.3  UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like protein 1 isoform X2

    UniProtKB/TrEMBL
    I3LFY2
    Related
    ENSSSCP00000022975.3, ENSSSCT00000025124.3
    Conserved Domains (1) summary
    cl11394
    Location:1 → 178
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  2. XM_005656882.3 → XP_005656939.2  UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like protein 1 isoform X2

    UniProtKB/TrEMBL
    I3LFY2
    Conserved Domains (1) summary
    cl11394
    Location:1 → 178
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  3. XM_021066333.1 → XP_020921992.1  UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8D1GSS4
    Conserved Domains (1) summary
    cl11394
    Location:92 → 226
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  4. XM_021066334.1 → XP_020921993.1  UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8D1GSS4
    Conserved Domains (1) summary
    cl11394
    Location:92 → 226
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

RNA

  1. XR_002336895.1 RNA Sequence

  2. XR_002336890.1 RNA Sequence

  3. XR_002336891.1 RNA Sequence

  4. XR_002336892.1 RNA Sequence

  5. XR_002336894.1 RNA Sequence

  6. XR_002336896.1 RNA Sequence

  7. XR_002336901.1 RNA Sequence

  8. XR_002336898.1 RNA Sequence

  9. XR_002336897.1 RNA Sequence

  10. XR_002336899.1 RNA Sequence

    Related
    ENSSSCT00000068858.2

  11. XR_002336900.1 RNA Sequence

  12. XR_002336893.1 RNA Sequence

Nucleotide Protein
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