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ALG8 ALG8 alpha-1,3-glucosyltransferase [ Sus scrofa (pig) ]

Gene ID: 100511030, updated on 18-Sep-2024

Summary

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Official Symbol
ALG8provided by VGNC
Official Full Name
ALG8 alpha-1,3-glucosyltransferaseprovided by VGNC
Primary source
VGNC:VGNC:85254
See related
Ensembl:ENSSSCG00000014887
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Ubiquitous expression in ovary (RPKM 7.9), spleen (RPKM 6.8) and 8 other tissues See more
Orthologs
human mouse all
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Genomic context

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See ALG8 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
13
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 9 NC_010451.4 (12500411..12532312, complement)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 9 NC_010451.3 (13600957..13632686, complement)

Chromosome 9 - NC_010451.4Genomic Context describing neighboring genes Neighboring gene thyroid hormone responsive Neighboring gene NADH:ubiquinone oxidoreductase subunit C2 Neighboring gene voltage-dependent calcium channel gamma-like subunit Neighboring gene potassium channel tetramerization domain containing 21

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase
Names
asparagine-linked glycosylation 8, alpha-1,3-glucosyltransferase homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010451.4 Reference Sscrofa11.1 Primary Assembly

    Range
    12500411..12532312 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013979181.2 → XP_013834635.1  probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A8D1DFT0, A0A8D2CCL5
    Related
    ENSSSCP00000063260.2, ENSSSCT00000068660.2
    Conserved Domains (1) summary
    pfam03155
    Location:51 → 500
    Alg6_Alg8; ALG6, ALG8 glycosyltransferase family

  2. XM_003129688.6 → XP_003129736.3  probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A480XBR2, A0A8D0Z3W3, I3L8Z7
    Related
    ENSSSCP00000020508.3, ENSSSCT00000025247.4
    Conserved Domains (1) summary
    pfam03155
    Location:22 → 508
    Alg6_Alg8; ALG6, ALG8 glycosyltransferase family
Nucleotide Protein
Heading Accession and Version

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