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GRID1-AS1 GRID1 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 100507470, updated on 10-Oct-2023

Summary

Official Symbol
GRID1-AS1provided by HGNC
Official Full Name
GRID1 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:44131
See related
Ensembl:ENSG00000234942 AllianceGenome:HGNC:44131
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward testis (RPKM 2.4) See more
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Genomic context

Location:
10q23.1
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (85577731..85607215)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (86457875..86487374)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (87337488..87366972)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 1520 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr10:87252333-87253142 Neighboring gene uncharacterized LOC105378404 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr10:87317701-87318900 Neighboring gene RNA, U6 small nuclear 325, pseudogene Neighboring gene RN7SK pseudogene 238 Neighboring gene glutamate ionotropic receptor delta type subunit 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:87529073-87529574 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:87529575-87530074 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3682 Neighboring gene RNA, 5S ribosomal pseudogene 322

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_038986.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC022028, AI223409, AK097655
    Related
    ENST00000630182.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    85577731..85607215
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    86457875..86487374
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)