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LOC100505498 uncharacterized LOC100505498 [ Homo sapiens (human) ]

Gene ID: 100505498, updated on 17-Jun-2024

Summary

Gene symbol
LOC100505498
Gene description
uncharacterized LOC100505498
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See LOC100505498 in Genome Data Viewer
Location:
2q22.3
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (145006401..145264110)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (145454415..145712150)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene testis expressed 41 Neighboring gene uncharacterized LOC105373663 Neighboring gene long intergenic non-protein coding RNA 1966 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr2:145764403-145765602 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16606 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16607 Neighboring gene ribosomal protein L6 pseudogene 5 Neighboring gene ReSE screen-validated silencer GRCh37_chr2:146248222-146248369 Neighboring gene uncharacterized LOC105373664

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    145006401..145264110
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_923410.3 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    145454415..145712150
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007072523.1 RNA Sequence