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Ccdc179 coiled-coil domain containing 179 [ Mus musculus (house mouse) ]

Gene ID: 100503036, updated on 17-Aug-2024

Summary

Official Symbol
Ccdc179provided by MGI
Official Full Name
coiled-coil domain containing 179provided by MGI
Primary source
MGI:MGI:1922779
See related
Ensembl:ENSMUSG00000094445 AllianceGenome:MGI:1922779
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
1700015G11Rik
Summary
Orthologous to human CCDC179 (coiled-coil domain containing 179). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Restricted expression toward testis adult (RPKM 70.4) See more
Orthologs
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Genomic context

See Ccdc179 in Genome Data Viewer
Location:
7 B4; 7 32.92 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (51661428..51665464, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (52011680..52015716, complement)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene Fanconi anemia, complementation group F Neighboring gene growth arrest specific 2 Neighboring gene STARR-seq mESC enhancer starr_18929 Neighboring gene STARR-seq mESC enhancer starr_18930 Neighboring gene STARR-positive B cell enhancer mm9_chr7:59261106-59261406 Neighboring gene small VCP/p97-interacting protein Neighboring gene karyopherin alpha 7 (importin alpha 8) pseudogene Neighboring gene predicted gene, 51482

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
coiled-coil domain-containing protein 179

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001195601.1NP_001182530.1  coiled-coil domain-containing protein 179

    See identical proteins and their annotated locations for NP_001182530.1

    Status: VALIDATED

    Source sequence(s)
    AC122017, AK005994, AV042221
    Consensus CDS
    CCDS57552.1
    UniProtKB/Swiss-Prot
    J3QM76
    UniProtKB/TrEMBL
    A0A087WSR9
    Related
    ENSMUSP00000136157.2, ENSMUST00000180038.8

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    51661428..51665464 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)