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plcl1 phospholipase C like 1 (inactive) [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100495595, updated on 17-Aug-2024

Summary

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Official Symbol
plcl1provided by Xenbase
Official Full Name
phospholipase C like 1 (inactive)provided by Xenbase
Primary source
Xenbase:XB-GENE-6468167
See related
Ensembl:ENSXETG00000032204
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
plce; plcl; prip; pldl1
Orthologs
human mouse all
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Genomic context

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See plcl1 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
6
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 9 NC_030685.2 (53545728..53691317, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 9 NC_030685.1 (48794317..48912715, complement)

Chromosome 9 - NC_030685.2Genomic Context describing neighboring genes Neighboring gene chromosome 9 C2orf69 homolog Neighboring gene uncharacterized XB5818974 Neighboring gene SATB homeobox 2 Neighboring gene transmembrane protein 237 Neighboring gene MAGUK p55 scaffold protein 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
enables phosphatidylinositol phospholipase C activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within lipid catabolic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within lipid metabolic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within signal transduction IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
inactive phospholipase C-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030685.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    53545728..53691317 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012971384.3 → XP_012826838.2  inactive phospholipase C-like protein 1

    UniProtKB/TrEMBL
    A0A6I8Q238, A0A8J0SWI7
    Related
    ENSXETP00000063367.3, ENSXETT00000060439.3
    Conserved Domains (4) summary
    cd00275
    Location:684 → 812
    C2_PLC_like; C2 domain present in Phosphoinositide-specific phospholipases C (PLC)
    cd08597
    Location:361 → 652
    PI-PLCc_PRIP_metazoa; Catalytic domain of metazoan phospholipase C related, but catalytically inactive protein
    cd13364
    Location:79 → 187
    PH_PLC_eta; Phospholipase C-eta (PLC-eta) pleckstrin homology (PH) domain
    cd16222
    Location:207 → 349
    EFh_PRIP1; EF-hand motif found in phospholipase C-related but catalytically inactive protein 1 (PRIP-1)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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