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fut6 fucosyltransferase 6 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100495376, updated on 17-Aug-2024

Summary

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Official Symbol
fut6provided by Xenbase
Official Full Name
fucosyltransferase 6provided by Xenbase
Primary source
Xenbase:XB-GENE-6037628
See related
Ensembl:ENSXETG00000043165
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
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Genomic context

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See fut6 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
3
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 4 NC_030680.2 (34165091..34185958, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 4 NC_030680.1 (39268886..39270290, complement)

Chromosome 4 - NC_030680.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116410494 Neighboring gene fucosyltransferase 6 gene 2 Neighboring gene fucosyltransferase 3 (Lewis blood group) Neighboring gene Harvey rat sarcoma viral oncogene homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within protein glycosylation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
  
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
galactoside 3(4)-L-fucosyltransferase
Names
fucosyltransferase 6 (alpha (1,3) fucosyltransferase)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030680.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    34165091..34185958 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018093234.2 → XP_017948723.1  galactoside 3(4)-L-fucosyltransferase

    UniProtKB/TrEMBL
    A0A6I8PJR0, Q6WNG2
    Related
    ENSXETP00000104964.1, ENSXETT00000105537.1
    Conserved Domains (2) summary
    pfam00852
    Location:176 → 345
    Glyco_transf_10; Glycosyltransferase family 10 (fucosyltransferase) C-term
    pfam17039
    Location:52 → 160
    Glyco_tran_10_N; Fucosyltransferase, N-terminal

  2. XM_031900633.1 → XP_031756493.1  galactoside 3(4)-L-fucosyltransferase

    UniProtKB/TrEMBL
    A0A6I8PJR0, Q6WNG2
    Related
    ENSXETP00000056777.4, ENSXETT00000056777.4
    Conserved Domains (2) summary
    pfam00852
    Location:176 → 345
    Glyco_transf_10; Glycosyltransferase family 10 (fucosyltransferase) C-term
    pfam17039
    Location:52 → 160
    Glyco_tran_10_N; Fucosyltransferase, N-terminal
Nucleotide Protein Strain
Heading Accession and Version

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