fbxw4 F-box and WD repeat domain containing 4 [Xenopus tropicalis (tropical clawed frog)] - Gene

Summary

Official Symbol: fbxw4provided by Xenbase
Official Full Name: F-box and WD repeat domain containing 4provided by Xenbase
Primary source: Xenbase:XB-GENE-852986
See related: Ensembl:ENSXETG00000021190 AllianceGenome:Xenbase:XB-GENE-852986
Gene type: protein coding
RefSeq status: MODEL
Organism: Xenopus tropicalis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as: dac; fbw4; fbwd4; shfm3; shsf3
Summary: Orthologous to human FBXW4 (F-box and WD repeat domain containing 4). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 7

Exon count:: 10

Annotation release	Status	Assembly	Chr	Location
104	current	UCB_Xtro_10.0 (GCF_000004195.4)	7	NC_030683.2 (30797691..30923608, complement)
103	previous assembly	Xenopus_tropicalis_v9.1 (GCF_000004195.3)	7	NC_030683.1 (22496847..22615074, complement)

Chromosome 7 - NC_030683.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Homology

NCBI Orthologs

Orthologs from OrthoDB

General protein information

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Preferred Names: F-box/WD repeat-containing protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

NC_030683.2 Reference UCB_Xtro_10.0 Primary Assembly

Range

30797691..30923608 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_004915857.4 → XP_004915914.1 F-box/WD repeat-containing protein 4 isoform X2

UniProtKB/TrEMBL

A0A8J0R5V5

Conserved Domains (3) summary

sd00039
Location:143 → 176

7WD40; WD40 repeat [structural motif]

pfam12937
Location:5 → 48

F-box-like

cl29593
Location:134 → 357

WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
XM_002936770.5 → XP_002936816.1 F-box/WD repeat-containing protein 4 isoform X1

UniProtKB/TrEMBL

F6YLQ4

Related

ENSXETP00000045813.5, ENSXETT00000045813.5

Conserved Domains (3) summary

sd00039
Location:143 → 176

7WD40; WD40 repeat [structural motif]

pfam12937
Location:5 → 48

F-box-like

cl29593
Location:134 → 379

WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
XM_031906009.1 → XP_031761869.1 F-box/WD repeat-containing protein 4 isoform X3

UniProtKB/TrEMBL

A0A8J1JVF6

Conserved Domains (2) summary

sd00039
Location:81 → 114

7WD40; WD40 repeat [structural motif]

cl29593
Location:72 → 317

WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...