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b3galt5.4 beta-1,3-galactosyltransferase 5 gene 4 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100494986, updated on 17-Aug-2024

Summary

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Official Symbol
b3galt5.4provided by Xenbase
Official Full Name
beta-1,3-galactosyltransferase 5 gene 4provided by Xenbase
Primary source
Xenbase:XB-GENE-1013344
See related
Ensembl:ENSXETG00000044775
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
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Genomic context

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See b3galt5.4 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
2
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 2 NC_030678.2 (11430697..11446458)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 2 NC_030678.1 (7427416..7443436)

Chromosome 2 - NC_030678.2Genomic Context describing neighboring genes Neighboring gene beta-1,3-galactosyltransferase 5-like Neighboring gene Beta-1,3-galactosyltransferase 5 gene 5 Neighboring gene uncharacterized LOC108645747 Neighboring gene beta-1,3-galactosyltransferase 5 gene 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within protein glycosylation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
  
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
beta-1,3-galactosyltransferase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030678.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    11430697..11446458
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002938735.3 → XP_002938781.1  beta-1,3-galactosyltransferase 5

    UniProtKB/TrEMBL
    A0A6I8PS91, A0A8J0QQ50
    Related
    ENSXETP00000060973.2, ENSXETT00000060165.3
    Conserved Domains (1) summary
    cl21608
    Location:116 → 304
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials