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b3galt5.2 beta-1,3-galactosyltransferase 5 gene 2 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100494668, updated on 17-Aug-2024

Summary

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Official Symbol
b3galt5.2provided by Xenbase
Official Full Name
beta-1,3-galactosyltransferase 5 gene 2provided by Xenbase
Primary source
Xenbase:XB-GENE-992036
See related
Ensembl:ENSXETG00000045829
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
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Genomic context

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See b3galt5.2 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
2
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 2 NC_030678.2 (11564358..11566719, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 2 NC_030678.1 (7557924..7560496, complement)

Chromosome 2 - NC_030678.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108645747 Neighboring gene Beta-1,3-galactosyltransferase 5 gene 3 Neighboring gene beta-1,3-galactosyltransferase 5 gene 1 Neighboring gene SH3 domain binding glutamate-rich protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within protein glycosylation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
  
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
beta-1,3-galactosyltransferase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030678.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    11564358..11566719 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012958252.3 → XP_012813706.2  beta-1,3-galactosyltransferase 5

    UniProtKB/TrEMBL
    A0A6I8PVV6, F7CGJ4
    Related
    ENSXETP00000059593.3, ENSXETT00000066232.3
    Conserved Domains (1) summary
    cl21608
    Location:77 → 265
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials