wdr72 WD repeat domain 72 [Xenopus tropicalis (tropical clawed frog)] - Gene

Summary

Official Symbol: wdr72provided by Xenbase
Official Full Name: WD repeat domain 72provided by Xenbase
Primary source: Xenbase:XB-GENE-1012344
See related: Ensembl:ENSXETG00000006344 AllianceGenome:Xenbase:XB-GENE-1012344
Gene type: protein coding
RefSeq status: MODEL
Organism: Xenopus tropicalis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Summary: Human ortholog(s) of this gene implicated in amelogenesis imperfecta hypomaturation type 2A3. Orthologous to human WDR72 (WD repeat domain 72). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 3

Exon count:: 22

Annotation release	Status	Assembly	Chr	Location
104	current	UCB_Xtro_10.0 (GCF_000004195.4)	3	NC_030679.2 (101320784..101442669)
103	previous assembly	Xenopus_tropicalis_v9.1 (GCF_000004195.3)	3	NC_030679.1 (91363236..91483324)

Chromosome 3 - NC_030679.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Homology

NCBI Orthologs

Orthologs from OrthoDB

General protein information

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Preferred Names: WD repeat-containing protein 72

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

NC_030679.2 Reference UCB_Xtro_10.0 Primary Assembly

Range

101320784..101442669

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_012959598.3 → XP_012815052.2 WD repeat-containing protein 72

UniProtKB/TrEMBL

A0A6I8Q2A7, A0A803KB71, F6SAF1

Related

ENSXETP00000013894.5, ENSXETT00000013894.5

Conserved Domains (2) summary

sd00039
Location:20 → 60

7WD40; WD40 repeat [structural motif]

cl29593
Location:17 → 248

WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
XM_031899179.1 → XP_031755039.1 WD repeat-containing protein 72

UniProtKB/TrEMBL

A0A6I8Q2A7, A0A803KB71, F6SAF1

Related

ENSXETP00000103740.1, ENSXETT00000107616.1

Conserved Domains (2) summary

sd00039
Location:20 → 60

7WD40; WD40 repeat [structural motif]

cl29593
Location:17 → 248

WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
XM_018092424.2 → XP_017947913.2 WD repeat-containing protein 72

UniProtKB/TrEMBL

A0A6I8Q2A7, A0A803KB71, F6SAF1

Related

ENSXETP00000117594.1, ENSXETT00000116907.1

Conserved Domains (2) summary

sd00039
Location:20 → 60

7WD40; WD40 repeat [structural motif]

cl29593
Location:17 → 248

WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...