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acvrl1 activin A receptor like type 1 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100493282, updated on 18-Sep-2024

Summary

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Official Symbol
acvrl1provided by Xenbase
Official Full Name
activin A receptor like type 1provided by Xenbase
Primary source
Xenbase:XB-GENE-484224
See related
Ensembl:ENSXETG00000031897
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
alk1; hht2; orw2; skr3; alk-1; tsr-i; acvrlk1
Orthologs
human mouse all
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Genomic context

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See acvrl1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
12
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 2 NC_030678.2 (135062495..135106449)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 2 NC_030678.1 (131757423..131810809)

Chromosome 2 - NC_030678.2Genomic Context describing neighboring genes Neighboring gene retinoblastoma 1 Neighboring gene lysophosphatidic acid receptor 6 Neighboring gene regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 Neighboring gene activin A receptor type 1B Neighboring gene trafficking regulator and scaffold protein tamalin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables transforming growth factor beta receptor activity IEA
Inferred from Electronic Annotation
more info
  
enables transmembrane receptor protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within cell surface receptor protein serine/threonine kinase signaling pathway IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within phosphorylation IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within protein phosphorylation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
serine/threonine-protein kinase receptor R3
Names
activin A receptor type 1
activin A receptor type II-like 1
activin A receptor type IL

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030678.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    135062495..135106449
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012957763.3 → XP_012813217.1  serine/threonine-protein kinase receptor R3 isoform X1

    See identical proteins and their annotated locations for XP_012813217.1

    UniProtKB/TrEMBL
    A0A6I8PLJ4
    Conserved Domains (2) summary
    cd14142
    Location:198 → 494
    STKc_ACVR1_ALK1; Catalytic domain of the Serine/Threonine Kinases, Activin Type I Receptor and Activin receptor-Like Kinase 1
    pfam08515
    Location:175 → 202
    TGF_beta_GS; Transforming growth factor beta type I GS-motif

  2. XM_031897141.1 → XP_031753001.1  serine/threonine-protein kinase receptor R3 isoform X2

    UniProtKB/TrEMBL
    A0A8J1J8K4
    Conserved Domains (2) summary
    cd14142
    Location:169 → 465
    STKc_ACVR1_ALK1; Catalytic domain of the Serine/Threonine Kinases, Activin Type I Receptor and Activin receptor-Like Kinase 1
    pfam08515
    Location:146 → 173
    TGF_beta_GS; Transforming growth factor beta type I GS-motif

  3. XM_002935116.5 → XP_002935162.2  serine/threonine-protein kinase receptor R3 isoform X1

    See identical proteins and their annotated locations for XP_002935162.2

    UniProtKB/TrEMBL
    A0A6I8PLJ4
    Related
    ENSXETP00000059199.3, ENSXETT00000065402.3
    Conserved Domains (2) summary
    cd14142
    Location:198 → 494
    STKc_ACVR1_ALK1; Catalytic domain of the Serine/Threonine Kinases, Activin Type I Receptor and Activin receptor-Like Kinase 1
    pfam08515
    Location:175 → 202
    TGF_beta_GS; Transforming growth factor beta type I GS-motif
Nucleotide Protein Strain
Heading Accession and Version

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