U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC100493218 alpha-1,4-N-acetylglucosaminyltransferase [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100493218, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
LOC100493218provided by Xenbase
Official Full Name
alpha-1,4-N-acetylglucosaminyltransferaseprovided by Xenbase
Primary source
Xenbase:XB-GENE-29081595
See related
Ensembl:ENSXETG00000045058
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC100493218 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
5
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 5 NC_030681.2 (131236773..131262833)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 5 NC_030681.1 (127607447..127608823)

Chromosome 5 - NC_030681.2Genomic Context describing neighboring genes Neighboring gene EPH receptor B1 Neighboring gene uncharacterized LOC105948528 Neighboring gene uncharacterized LOC116410954 Neighboring gene collagen alpha-1(I) chain-like Neighboring gene alpha-1,4-N-acetylglucosaminyltransferase

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
  
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
alpha-1,4-N-acetylglucosaminyltransferase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030681.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    131236773..131262833
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031902643.1 → XP_031758503.1  alpha-1,4-N-acetylglucosaminyltransferase

    UniProtKB/TrEMBL
    A0A803J3A5
    Conserved Domains (2) summary
    pfam04572
    Location:223 → 345
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region
    cl19952
    Location:84 → 199
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif

  2. XM_031902642.1 → XP_031758502.1  alpha-1,4-N-acetylglucosaminyltransferase

    UniProtKB/TrEMBL
    A0A803J3A5
    Conserved Domains (2) summary
    pfam04572
    Location:223 → 345
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region
    cl19952
    Location:84 → 199
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif

  3. XM_018094470.2 → XP_017949959.2  alpha-1,4-N-acetylglucosaminyltransferase

    UniProtKB/TrEMBL
    A0A803J3A5
    Related
    ENSXETP00000102298.1, ENSXETT00000121511.1
    Conserved Domains (2) summary
    pfam04572
    Location:223 → 345
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region
    cl19952
    Location:84 → 199
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.