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chst3 carbohydrate (chondroitin 6) sulfotransferase 3 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100492673, updated on 17-Aug-2024

Summary

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Official Symbol
chst3provided by Xenbase
Official Full Name
carbohydrate (chondroitin 6) sulfotransferase 3provided by Xenbase
Primary source
Xenbase:XB-GENE-993289
See related
Ensembl:ENSXETG00000049432
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Orthologs
human mouse all
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Genomic context

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See chst3 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
3
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 7 NC_030683.2 (45976746..46028595, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 7 NC_030683.1 (51005951..51057005)

Chromosome 7 - NC_030683.2Genomic Context describing neighboring genes Neighboring gene macroH2A.2 histone Neighboring gene AIF family member 2 Neighboring gene prosaposin (variant Gaucher disease and variant metachromatic leukodystrophy) Neighboring gene cadherin-related 23 Neighboring gene V-set immunoregulatory receptor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables transferase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
carbohydrate sulfotransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030683.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    45976746..46028595 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002939517.5 → XP_002939563.2  carbohydrate sulfotransferase 3

    UniProtKB/TrEMBL
    A0A803J4U5
    Related
    ENSXETP00000102861.1, ENSXETT00000115249.1
    Conserved Domains (1) summary
    cl21551
    Location:249 → 435
    Sulfotransfer_3; Sulfotransferase family
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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