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LOC100492379 alpha-1,4-N-acetylglucosaminyltransferase [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100492379, updated on 26-Jun-2024

Summary

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Official Symbol
LOC100492379provided by Xenbase
Official Full Name
alpha-1,4-N-acetylglucosaminyltransferaseprovided by Xenbase
Primary source
Xenbase:XB-GENE-29081135
See related
Ensembl:ENSXETG00000039284
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
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Genomic context

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See LOC100492379 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
5
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 5 NC_030681.2 (131338835..131355555)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) Unplaced Scaffold NW_016683514.1 (33923..54149)

Chromosome 5 - NC_030681.2Genomic Context describing neighboring genes Neighboring gene alpha-1,4-N-acetylglucosaminyltransferase Neighboring gene collagen alpha-1(I) chain-like Neighboring gene alpha-1,4-N-acetylglucosaminyltransferase Neighboring gene alpha-1,4-N-acetylglucosaminyltransferase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
  
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
alpha-1,4-N-acetylglucosaminyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030681.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    131338835..131355555
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002935064.4 → XP_002935110.1  alpha-1,4-N-acetylglucosaminyltransferase

    See identical proteins and their annotated locations for XP_002935110.1

    UniProtKB/TrEMBL
    A0A803JVQ8
    Conserved Domains (2) summary
    pfam04572
    Location:213 → 334
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region
    cl19952
    Location:73 → 188
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif

  2. XM_031902650.1 → XP_031758510.1  alpha-1,4-N-acetylglucosaminyltransferase

    UniProtKB/TrEMBL
    A0A803JVQ8
    Conserved Domains (2) summary
    pfam04572
    Location:213 → 334
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region
    cl19952
    Location:73 → 188
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif

  3. XM_012954149.2 → XP_012809603.1  alpha-1,4-N-acetylglucosaminyltransferase

    See identical proteins and their annotated locations for XP_012809603.1

    UniProtKB/TrEMBL
    A0A803JVQ8
    Related
    ENSXETP00000112075.1, ENSXETT00000113847.1
    Conserved Domains (2) summary
    pfam04572
    Location:213 → 334
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region
    cl19952
    Location:73 → 188
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif

  4. XM_031902649.1 → XP_031758509.1  alpha-1,4-N-acetylglucosaminyltransferase

    UniProtKB/TrEMBL
    A0A803JVQ8
    Conserved Domains (2) summary
    pfam04572
    Location:213 → 334
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region
    cl19952
    Location:73 → 188
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
Nucleotide Protein Strain
Heading Accession and Version

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