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LOC100491539 glucosaminyl (N-acetyl) transferase 2 (I blood group) [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100491539, updated on 17-Aug-2024

Summary

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Official Symbol
LOC100491539provided by Xenbase
Official Full Name
glucosaminyl (N-acetyl) transferase 2 (I blood group)provided by Xenbase
Primary source
Xenbase:XB-GENE-29080739
See related
Ensembl:ENSXETG00000030703
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
gcnt2
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Genomic context

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See LOC100491539 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
3
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 6 NC_030682.2 (90409876..90425073)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 6 NC_030682.1 (84449001..84463991)

Chromosome 6 - NC_030682.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116411712 Neighboring gene tto transcription factor AP-2 alpha Neighboring gene uncharacterized LOC116411723 Neighboring gene glucosaminyl (N-acetyl) transferase 2 (I blood group), gene 2 Neighboring gene PAK1 interacting protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase
Names
glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030682.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    90409876..90425073
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002932685.3 → XP_002932731.2  N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase

    UniProtKB/TrEMBL
    A0A6I8PZE9, A0A803JZV5
    Related
    ENSXETP00000060024.2, ENSXETT00000065026.3
    Conserved Domains (1) summary
    pfam02485
    Location:94 → 351
    Branch; Core-2/I-Branching enzyme
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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