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pla1a phospholipase A1 member A [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100490448, updated on 4-Nov-2024

Summary

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Official Symbol
pla1aprovided by Xenbase
Official Full Name
phospholipase A1 member Aprovided by Xenbase
Primary source
Xenbase:XB-GENE-995106
See related
Ensembl:ENSXETG00000045043 AllianceGenome:Xenbase:XB-GENE-995106
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
pspla1; ps-pla1
Summary
Predicted to enable lipase activity and metal ion binding activity. Predicted to act upstream of or within lipid metabolic process. Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
human mouse all
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Genomic context

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See pla1a in Genome Data Viewer
Location:
chromosome: 2
Exon count:
11
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 2 NC_030678.2 (2013014..2030412, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) Unplaced Scaffold NW_016684427.1 (37946..39649)

Chromosome 2 - NC_030678.2Genomic Context describing neighboring genes Neighboring gene cytochrome c oxidase copper chaperone COX17 Neighboring gene popeye domain cAMP effector 2 Neighboring gene 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase Neighboring gene hydroxyacid oxidase 2 (long chain)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables lipase activity IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within lipid metabolic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
phospholipase A1 member A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030678.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    2013014..2030412 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031896426.1 → XP_031752286.1  phospholipase A1 member A isoform X3

    UniProtKB/TrEMBL
    A0A8J1J6K1
    Conserved Domains (1) summary
    cd00707
    Location:57 → 265
    Pancreat_lipase_like; Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the ...

  2. XM_031896424.1 → XP_031752284.1  phospholipase A1 member A isoform X1

    UniProtKB/TrEMBL
    A0A803K9P4, A0A8J1J356
    Conserved Domains (1) summary
    cd00707
    Location:57 → 316
    Pancreat_lipase_like; Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the ...

  3. XM_031896425.1 → XP_031752285.1  phospholipase A1 member A isoform X2

    UniProtKB/TrEMBL
    A0A803JSW8, A0A803K9P4
    Related
    ENSXETP00000111096.1, ENSXETT00000113430.1
    Conserved Domains (1) summary
    cd00707
    Location:48 → 307
    Pancreat_lipase_like; Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the ...
Nucleotide Protein Strain
Heading Accession and Version

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