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LOC100488076 zinc finger protein 436-like [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100488076, updated on 17-Aug-2024

Summary

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Official Symbol
LOC100488076provided by Xenbase
Official Full Name
zinc finger protein 436-likeprovided by Xenbase
Primary source
Xenbase:XB-GENE-29079059
See related
Ensembl:ENSXETG00000030967
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
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Genomic context

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See LOC100488076 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
8
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 5 NC_030681.2 (163288733..163342420, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) Unplaced Scaffold NW_016684501.1 (372..6352)

Chromosome 5 - NC_030681.2Genomic Context describing neighboring genes Neighboring gene zinc finger protein 182 Neighboring gene zinc finger protein 84 like Neighboring gene vomeronasal type-2 receptor 26-like Neighboring gene oligosaccharyltransferase complex subunit 4, non-catalytic

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within anatomical structure morphogenesis IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within animal organ development IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within cell differentiation IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
zinc finger protein 436-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030681.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    163288733..163342420 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031901965.1 → XP_031757825.1  zinc finger protein 436-like

    UniProtKB/TrEMBL
    A0A8J1JLD0
    Related
    ENSXETP00000062240.3, ENSXETT00000061563.3
    Conserved Domains (3) summary
    COG5048
    Location:304 → 523
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:308 → 328
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl02581
    Location:25 → 79
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box

RNA

  1. XR_004222658.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials