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chst15 carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100487411, updated on 17-Aug-2024

Summary

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Official Symbol
chst15provided by Xenbase
Official Full Name
carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15provided by Xenbase
Primary source
Xenbase:XB-GENE-990674
See related
Ensembl:ENSXETG00000046777
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Orthologs
human mouse all
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Genomic context

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See chst15 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
7
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 7 NC_030683.2 (19786580..19799658)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 7 NC_030683.1 (11468846..11503938)

Chromosome 7 - NC_030683.2Genomic Context describing neighboring genes Neighboring gene RAC-alpha serine/threonine-protein kinase Neighboring gene uncharacterized LOC108648045 Neighboring gene carboxypeptidase X (M14 family), member 2 Neighboring gene G protein-coupled receptor 26

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables transferase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
carbohydrate sulfotransferase 15

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030683.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    19786580..19799658
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031906284.1 → XP_031762144.1  carbohydrate sulfotransferase 15

    UniProtKB/TrEMBL
    A0A803JNL4
    Related
    ENSXETP00000109558.1, ENSXETT00000106515.1
    Conserved Domains (1) summary
    pfam13469
    Location:172 → 415
    Sulfotransfer_3; Sulfotransferase family
Nucleotide Protein Strain
Heading Accession and Version

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Molecular Biology Databases
Research Materials