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cdr2l cerebellar degeneration-related protein 2-like [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100486752, updated on 4-Nov-2024

Summary

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Official Symbol
cdr2lprovided by Xenbase
Official Full Name
cerebellar degeneration-related protein 2-likeprovided by Xenbase
Primary source
Xenbase:XB-GENE-969163
See related
Ensembl:ENSXETG00000045622 AllianceGenome:Xenbase:XB-GENE-969163
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Summary
Orthologous to human CDR2L (cerebellar degeneration related protein 2 like). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
human mouse all
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Genomic context

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See cdr2l in Genome Data Viewer
Location:
chromosome: 10
Exon count:
7
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 10 NC_030686.2 (44290814..44300763)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 10 NC_030686.1 (35697666..35706390)

Chromosome 10 - NC_030686.2Genomic Context describing neighboring genes Neighboring gene otopetrin 3 Neighboring gene HID1 domain containing Neighboring gene mitochondrial ribosomal protein L58 Neighboring gene transfer RNA arginine (anticodon CCU)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
cerebellar degeneration-related protein 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030686.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    44290814..44300763
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002939980.4 → XP_002940026.3  cerebellar degeneration-related protein 2-like

    UniProtKB/TrEMBL
    A0A803JSM3
    Related
    ENSXETP00000112236.1, ENSXETT00000107237.1
    Conserved Domains (1) summary
    COG1196
    Location:23 → 286
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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