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plppr2 phospholipid phosphatase related 2 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100485784, updated on 4-Nov-2024

Summary

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Official Symbol
plppr2provided by Xenbase
Official Full Name
phospholipid phosphatase related 2provided by Xenbase
Primary source
Xenbase:XB-GENE-6031106
See related
Ensembl:ENSXETG00000007925 AllianceGenome:Xenbase:XB-GENE-6031106
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
lppr2
Summary
Predicted to act upstream of or within phospholipid metabolic process. Predicted to be located in membrane. Orthologous to human PLPPR2 (phospholipid phosphatase related 2). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
human mouse all
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Genomic context

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See plppr2 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
8
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 3 NC_030679.2 (140102202..140116281)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 3 NC_030679.1 (129124159..129137774)

Chromosome 3 - NC_030679.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116409518 Neighboring gene RAB3D, member RAS oncogene family Neighboring gene transmembrane protein 205 Neighboring gene SWIM-type zinc finger 7 associated protein 1 Neighboring gene erythropoietin receptor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Process Evidence Code Pubs
acts_upstream_of_or_within phospholipid metabolic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
phospholipid phosphatase-related protein type 2
Names
lipid phosphate phosphatase-related protein type 2
lipid phosphate phosphatase-related protein type 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030679.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    140102202..140116281
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002939115.5 → XP_002939161.2  phospholipid phosphatase-related protein type 2 isoform X3

    UniProtKB/TrEMBL
    A0A8J0QSK7
    Conserved Domains (1) summary
    cd03384
    Location:134 → 283
    PAP2_wunen; PAP2, wunen subfamily. Most likely a family of membrane associated phosphatidic acid phosphatases. Wunen is a drosophila protein expressed in the central nervous system, which provides repellent activity towards primordial germ cells (PGCs), controls the ...

  2. XM_031899441.1 → XP_031755301.1  phospholipid phosphatase-related protein type 2 isoform X1

    UniProtKB/TrEMBL
    A0A8J1JF72
    Conserved Domains (1) summary
    cd03384
    Location:134 → 283
    PAP2_wunen; PAP2, wunen subfamily. Most likely a family of membrane associated phosphatidic acid phosphatases. Wunen is a drosophila protein expressed in the central nervous system, which provides repellent activity towards primordial germ cells (PGCs), controls the ...

  3. XM_004918903.4 → XP_004918960.1  phospholipid phosphatase-related protein type 2 isoform X2

    UniProtKB/TrEMBL
    F6V0R4
    Related
    ENSXETP00000017376.4, ENSXETT00000017376.5
    Conserved Domains (2) summary
    cd03384
    Location:134 → 283
    PAP2_wunen; PAP2, wunen subfamily. Most likely a family of membrane associated phosphatidic acid phosphatases. Wunen is a drosophila protein expressed in the central nervous system, which provides repellent activity towards primordial germ cells (PGCs), controls the ...
    pfam03154
    Location:292 → 344
    Atrophin-1; Atrophin-1 family
Nucleotide Protein Strain
Heading Accession and Version

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