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dpy19l1 dpy-19 like C-mannosyltransferase 1 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100485357, updated on 14-Nov-2024

Summary

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Official Symbol
dpy19l1provided by Xenbase
Official Full Name
dpy-19 like C-mannosyltransferase 1provided by Xenbase
Primary source
Xenbase:XB-GENE-6040559
See related
Ensembl:ENSXETG00000049160 AllianceGenome:Xenbase:XB-GENE-6040559
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Summary
Predicted to be located in membrane. Human ortholog(s) of this gene implicated in spermatogenic failure 9. Orthologous to several human genes including DPY19L1 (dpy-19 like C-mannosyltransferase 1). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
human mouse all
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Genomic context

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See dpy19l1 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
25
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 9 NC_030685.2 (8271880..8301933)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 9 NC_030685.1 (3584224..3599835)

Chromosome 9 - NC_030685.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100485044 Neighboring gene uncharacterized LOC116407650 Neighboring gene guanylate binding protein 7 Neighboring gene uncharacterized LOC116407714

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
probable C-mannosyltransferase DPY19L1
Names
dpy-19-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030685.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    8271880..8301933
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031892889.1 → XP_031748749.1  probable C-mannosyltransferase DPY19L1

    UniProtKB/TrEMBL
    A0A803JHW1, A0A803JW02
    Related
    ENSXETP00000107480.1, ENSXETT00000110840.1
    Conserved Domains (1) summary
    pfam10034
    Location:100 → 749
    Dpy19; Q-cell neuroblast polarisation

  2. XM_031892888.1 → XP_031748748.1  probable C-mannosyltransferase DPY19L1

    UniProtKB/TrEMBL
    A0A803JHW1, A0A803JW02
    Related
    ENSXETP00000117135.1, ENSXETT00000118338.1
    Conserved Domains (1) summary
    pfam10034
    Location:100 → 749
    Dpy19; Q-cell neuroblast polarisation
Nucleotide Protein Strain
Heading Accession and Version

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