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senp1 SUMO specific peptidase 1 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100485161, updated on 17-Aug-2024

Summary

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Official Symbol
senp1provided by Xenbase
Official Full Name
SUMO specific peptidase 1provided by Xenbase
Primary source
Xenbase:XB-GENE-1014921
See related
Ensembl:ENSXETG00000044641
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
SuPr-2; xsenp1; senp1-a; senp1-b
Orthologs
human mouse all
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Genomic context

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See senp1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
18
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 2 NC_030678.2 (143500821..143520057)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 2 NC_030678.1 (140253398..140272235)

Chromosome 2 - NC_030678.2Genomic Context describing neighboring genes Neighboring gene phosphofructokinase, muscle Neighboring gene uncharacterized LOC116408885 Neighboring gene olfactory receptor family 5 subfamily F member 1 like 1 gene 1 Neighboring gene olfactory receptor family 5 subfamily F member 1 like 1 gene 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables cysteine-type peptidase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within proteolysis IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
sentrin-specific protease 1
Names
SUMO1/sentrin specific peptidase 1
sentrin/SUMO-specific protease 1
XP_002933743.1
XP_004911967.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030678.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    143500821..143520057
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002933697.5 → XP_002933743.1  sentrin-specific protease 1

    See identical proteins and their annotated locations for XP_002933743.1

    UniProtKB/TrEMBL
    A0A803J8M1, A0A803K148
    Related
    ENSXETP00000114031.1, ENSXETT00000122307.1
    Conserved Domains (1) summary
    COG5160
    Location:382 → 621
    ULP1; Protease, Ulp1 family [Posttranslational modification, protein turnover, chaperones]

  2. XM_004911910.4 → XP_004911967.1  sentrin-specific protease 1

    See identical proteins and their annotated locations for XP_004911967.1

    UniProtKB/TrEMBL
    A0A803J8M1, A0A803K148
    Related
    ENSXETP00000104225.1, ENSXETT00000108657.1
    Conserved Domains (1) summary
    COG5160
    Location:382 → 621
    ULP1; Protease, Ulp1 family [Posttranslational modification, protein turnover, chaperones]

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001016222.1: Suppressed sequence

    Description
    NM_001016222.1: This RefSeq record was removed by NCBI staff. Contact info@ncbi.nlm.nih.gov for further information.
Nucleotide Protein Strain
Heading Accession and Version

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