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KDSR 3-ketodihydrosphingosine reductase [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100484598, updated on 8-Mar-2024

Summary

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Gene symbol
KDSR
Gene description
3-ketodihydrosphingosine reductase
Locus tag
PANDA_005876
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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See KDSR in Genome Data Viewer
Location:
chromosome: 14
Exon count:
9
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 14 NC_048231.1 (93414746..93447829, complement)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217490.1 (1938199..1978502, complement)

Chromosome 14 - NC_048231.1Genomic Context describing neighboring genes Neighboring gene BCL2 apoptosis regulator Neighboring gene uncharacterized LOC117795993 Neighboring gene proteasome activator complex subunit 1-like Neighboring gene uncharacterized LOC117795925 Neighboring gene uncharacterized LOC117796025

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3-dehydrosphinganine reductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in 3-keto-sphinganine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
3-ketodihydrosphingosine reductase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048231.1 Reference ASM200744v2 Primary Assembly

    Range
    93414746..93447829 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034642143.1 → XP_034498034.1  3-ketodihydrosphingosine reductase isoform X2

  2. XM_034642142.1 → XP_034498033.1  3-ketodihydrosphingosine reductase isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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