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PHOSPHO1 phosphoethanolamine/phosphocholine phosphatase 1 [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100484341, updated on 8-Mar-2024

Summary

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Gene symbol
PHOSPHO1
Gene description
phosphoethanolamine/phosphocholine phosphatase 1
Locus tag
PANDA_005031
See related
Ensembl:ENSAMEG00000031233
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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See PHOSPHO1 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
5
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 13 NC_048230.1 (21732639..21738486)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217447.1 (2339538..2345203, complement)

Chromosome 13 - NC_048230.1Genomic Context describing neighboring genes Neighboring gene prohibitin 1 Neighboring gene zinc finger protein 652 Neighboring gene ABI family member 3 Neighboring gene G protein subunit gamma transducin 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in bone mineralization involved in bone maturation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphoethanolamine/phosphocholine phosphatase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048230.1 Reference ASM200744v2 Primary Assembly

    Range
    21732639..21738486
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034640240.1 → XP_034496131.1  phosphoethanolamine/phosphocholine phosphatase isoform X1

  2. XM_034640239.1 → XP_034496130.1  phosphoethanolamine/phosphocholine phosphatase isoform X1

  3. XM_011221854.3 → XP_011220156.2  phosphoethanolamine/phosphocholine phosphatase isoform X1

  4. XM_034640241.1 → XP_034496132.1  phosphoethanolamine/phosphocholine phosphatase isoform X2

    UniProtKB/TrEMBL
    D2H581

  5. XM_034640242.1 → XP_034496133.1  phosphoethanolamine/phosphocholine phosphatase isoform X3

    UniProtKB/TrEMBL
    A0A7N5P689, D2H581
    Related
    ENSAMEP00000036252.1, ENSAMET00000030514.1
Nucleotide Protein
Heading Accession and Version

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