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TKTL1 transketolase like 1 [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100484224, updated on 8-Mar-2024

Summary

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Gene symbol
TKTL1
Gene description
transketolase like 1
Locus tag
PANDA_018912
See related
Ensembl:ENSAMEG00000018441
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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See TKTL1 in Genome Data Viewer
Location:
chromosome: X
Exon count:
13
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) X NC_048238.1 (111450161..111474361)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003218884.1 (2996..25235, complement)

Chromosome X - NC_048238.1Genomic Context describing neighboring genes Neighboring gene long-wave-sensitive opsin 1 Neighboring gene testis expressed 28 Neighboring gene uncharacterized LOC117797440 Neighboring gene emerin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The sequence and de novo assembly of the giant panda genome. Li R, et al. Nature, 2010 Jan 21. PMID 20010809, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables thiamine pyrophosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transketolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transketolase-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048238.1 Reference ASM200744v2 Primary Assembly

    Range
    111450161..111474361
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011236732.3 → XP_011235034.2  transketolase-like protein 1

    UniProtKB/TrEMBL
    G1MJG1
    Related
    ENSAMEP00000019496.2, ENSAMET00000020265.2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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