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DGKB diacylglycerol kinase beta [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100483868, updated on 8-Mar-2024

Summary

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Gene symbol
DGKB
Gene description
diacylglycerol kinase beta
Locus tag
PANDA_013704
See related
Ensembl:ENSAMEG00000016332
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
27
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 1 NC_048218.1 (153342630..154012553, complement)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003218087.1 (371649..894841, complement)

Chromosome 1 - NC_048218.1Genomic Context describing neighboring genes Neighboring gene transcription factor BTF3-like Neighboring gene ETS variant transcription factor 1 Neighboring gene small nucleolar RNA SNORA57 Neighboring gene tubulin alpha-1A chain-like Neighboring gene alkylglycerol monooxygenase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The sequence and de novo assembly of the giant panda genome. Li R, et al. Nature, 2010 Jan 21. PMID 20010809, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP-dependent diacylglycerol kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in diacylglycerol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein kinase C-activating G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
diacylglycerol kinase beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048218.1 Reference ASM200744v2 Primary Assembly

    Range
    153342630..154012553 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034668563.1 → XP_034524454.1  diacylglycerol kinase beta isoform X3

    Related
    ENSAMEP00000041379.1, ENSAMET00000029047.1
    Conserved Domains (6) summary
    smart00045
    Location:569 → 749
    DAGKa; Diacylglycerol kinase accessory domain (presumed)
    smart00046
    Location:427 → 548
    DAGKc; Diacylglycerol kinase catalytic domain (presumed)
    cd00051
    Location:152 → 221
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    pfam14513
    Location:6 → 148
    DAG_kinase_N; Diacylglycerol kinase N-terminus
    cd20845
    Location:237 → 302
    C1_DGKbeta_rpt1; first protein kinase C conserved region 1 (C1 domain) found in diacylglycerol kinase beta (DAG kinase beta) and similar proteins
    cd20891
    Location:307 → 365
    C1_DGKbeta_rpt2; second protein kinase C conserved region 1 (C1 domain) found in diacylglycerol kinase beta (DAG kinase beta) and similar proteins

  2. XM_034668559.1 → XP_034524450.1  diacylglycerol kinase beta isoform X2

    Related
    ENSAMEP00000032401.1, ENSAMET00000049804.1
    Conserved Domains (4) summary
    smart00109
    Location:244 → 293
    C1; Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains)
    smart00045
    Location:580 → 760
    DAGKa; Diacylglycerol kinase accessory domain (presumed)
    smart00046
    Location:438 → 559
    DAGKc; Diacylglycerol kinase catalytic domain (presumed)
    cd00051
    Location:152 → 221
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...

  3. XM_034668553.1 → XP_034524444.1  diacylglycerol kinase beta isoform X1

    UniProtKB/TrEMBL
    G1MD26
    Related
    ENSAMEP00000017254.2, ENSAMET00000017961.2
    Conserved Domains (4) summary
    smart00109
    Location:244 → 293
    C1; Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains)
    smart00045
    Location:581 → 761
    DAGKa; Diacylglycerol kinase accessory domain (presumed)
    smart00046
    Location:439 → 560
    DAGKc; Diacylglycerol kinase catalytic domain (presumed)
    cd00051
    Location:152 → 221
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...

  4. XM_034668554.1 → XP_034524445.1  diacylglycerol kinase beta isoform X1

    UniProtKB/TrEMBL
    G1MD26
    Conserved Domains (4) summary
    smart00109
    Location:244 → 293
    C1; Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains)
    smart00045
    Location:581 → 761
    DAGKa; Diacylglycerol kinase accessory domain (presumed)
    smart00046
    Location:439 → 560
    DAGKc; Diacylglycerol kinase catalytic domain (presumed)
    cd00051
    Location:152 → 221
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
Nucleotide Protein
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