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PDHB pyruvate dehydrogenase E1 subunit beta [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100482813, updated on 11-Apr-2024

Summary

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Gene symbol
PDHB
Gene description
pyruvate dehydrogenase E1 subunit beta
Locus tag
PANDA_001392
See related
Ensembl:ENSAMEG00000012042
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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See PDHB in Genome Data Viewer
Location:
chromosome: 4
Exon count:
10
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 4 NC_048221.1 (25659888..25665019, complement)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217312.1 (3295904..3301017, complement)

Chromosome 4 - NC_048221.1Genomic Context describing neighboring genes Neighboring gene abhydrolase domain containing 6, acylglycerol lipase Neighboring gene hydroxyacyl-thioester dehydratase type 2 Neighboring gene PX domain containing serine/threonine kinase like Neighboring gene potassium channel tetramerization domain containing 6 Neighboring gene uncharacterized LOC117801907 Neighboring gene acyl-CoA oxidase 2 Neighboring gene family with sequence similarity 107 member A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pyruvate dehydrogenase (acetyl-transferring) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in acetyl-CoA biosynthetic process from pyruvate IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pyruvate dehydrogenase E1 component subunit beta, mitochondrial
Names
pyruvate dehydrogenase (lipoamide) beta
pyruvate dehydrogenase E1 beta subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048221.1 Reference ASM200744v2 Primary Assembly

    Range
    25659888..25665019 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002913529.4 → XP_002913575.1  pyruvate dehydrogenase E1 component subunit beta, mitochondrial

    UniProtKB/TrEMBL
    A0A7N5JY85, G1M029
    Related
    ENSAMEP00000032201.1, ENSAMET00000048746.1
    Conserved Domains (1) summary
    cl27364
    Location:32 → 355
    Transketolase_C; Transketolase, C-terminal domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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