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L1CAM L1 cell adhesion molecule [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100482790, updated on 8-Mar-2024

Summary

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Gene symbol
L1CAM
Gene description
L1 cell adhesion molecule
See related
Ensembl:ENSAMEG00000018461
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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See L1CAM in Genome Data Viewer
Location:
chromosome: X
Exon count:
28
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) X NC_048238.1 (111151217..111175226, complement)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003218884.1 (296940..308536)

Chromosome X - NC_048238.1Genomic Context describing neighboring genes Neighboring gene PDZ domain containing 4 Neighboring gene 40S ribosomal protein S29-like Neighboring gene arginine vasopressin receptor 2 Neighboring gene Rho GTPase activating protein 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
neural cell adhesion molecule L1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048238.1 Reference ASM200744v2 Primary Assembly

    Range
    111151217..111175226 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034649421.1 → XP_034505312.1  neural cell adhesion molecule L1 isoform X2

    UniProtKB/TrEMBL
    A0A7N5JDZ6, G1MJI2
    Related
    ENSAMEP00000019517.2, ENSAMET00000020286.2

  2. XM_034649420.1 → XP_034505311.1  neural cell adhesion molecule L1 isoform X1

    UniProtKB/TrEMBL
    A0A7N5KPV5
    Related
    ENSAMEP00000043021.1, ENSAMET00000041202.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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