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PIGX phosphatidylinositol glycan anchor biosynthesis class X [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100482743, updated on 8-Mar-2024

Summary

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Gene symbol
PIGX
Gene description
phosphatidylinositol glycan anchor biosynthesis class X
Locus tag
PANDA_004896
See related
Ensembl:ENSAMEG00000003759
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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See PIGX in Genome Data Viewer
Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 1 NC_048218.1 (68494597..68530419)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217444.1 (409712..447849, complement)

Chromosome 1 - NC_048218.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L7a-like Neighboring gene negative regulator of reactive oxygen species Neighboring gene ras-related protein Rab-5A-like Neighboring gene centrosomal protein 19 Neighboring gene p21 (RAC1) activated kinase 2 Neighboring gene SUMO specific peptidase 5 Neighboring gene 40S ribosomal protein S24-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol-glycan biosynthesis class X protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048218.1 Reference ASM200744v2 Primary Assembly

    Range
    68494597..68530419
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034671163.1 → XP_034527054.1  phosphatidylinositol-glycan biosynthesis class X protein

    UniProtKB/TrEMBL
    G1LAP0
    Related
    ENSAMEP00000003963.2, ENSAMET00000004123.2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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