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FUT9 fucosyltransferase 9 [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100482132, updated on 8-Mar-2024

Summary

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Gene symbol
FUT9
Gene description
fucosyltransferase 9
Locus tag
PANDA_017864
See related
Ensembl:ENSAMEG00000019229
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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See FUT9 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
6
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 10 NC_048227.1 (47300915..47493290)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003218671.1 (150197..334396, complement)

Chromosome 10 - NC_048227.1Genomic Context describing neighboring genes Neighboring gene cytochrome c oxidase subunit 5B, mitochondrial-like Neighboring gene mannosidase endo-alpha Neighboring gene UFM1 specific ligase 1 Neighboring gene four and a half LIM domains 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The sequence and de novo assembly of the giant panda genome. Li R, et al. Nature, 2010 Jan 21. PMID 20010809, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-(1->3)-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048227.1 Reference ASM200744v2 Primary Assembly

    Range
    47300915..47493290
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034670843.1 → XP_034526734.1  4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9

    UniProtKB/TrEMBL
    D2HYP0, G1MLR2

  2. XM_034670844.1 → XP_034526735.1  4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9

    UniProtKB/TrEMBL
    D2HYP0, G1MLR2

  3. XM_034670845.1 → XP_034526736.1  4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9

    UniProtKB/TrEMBL
    D2HYP0, G1MLR2
    Related
    ENSAMEP00000020300.2, ENSAMET00000021069.2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials