U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SULF2 sulfatase 2 [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100482124, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
SULF2
Gene description
sulfatase 2
Locus tag
PANDA_016742
See related
Ensembl:ENSAMEG00000013098
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See SULF2 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
21
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 13 NC_048230.1 (58113866..58232688)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003218488.1 (4548..73576)

Chromosome 13 - NC_048230.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117795672 Neighboring gene uncharacterized LOC117795459 Neighboring gene nuclear receptor coactivator 3 Neighboring gene uncharacterized LOC109490798

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The sequence and de novo assembly of the giant panda genome. Li R, et al. Nature, 2010 Jan 21. PMID 20010809, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosamine-6-sulfatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycosaminoglycan binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
LOW QUALITY PROTEIN: extracellular sulfatase Sulf-2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048230.1 Reference ASM200744v2 Primary Assembly

    Range
    58113866..58232688
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034639864.1 → XP_034495755.1  LOW QUALITY PROTEIN: extracellular sulfatase Sulf-2

    UniProtKB/TrEMBL
    G1M3J9
    Related
    ENSAMEP00000013911.2, ENSAMET00000014489.2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials