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GCNT1 glucosaminyl (N-acetyl) transferase 1 [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100481771, updated on 8-Mar-2024

Summary

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Gene symbol
GCNT1
Gene description
glucosaminyl (N-acetyl) transferase 1
Locus tag
PANDA_013889
See related
Ensembl:ENSAMEG00000019017
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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See GCNT1 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
5
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 17 NC_048234.1 (30647839..30673296)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003218097.1 (540633..566426)

Chromosome 17 - NC_048234.1Genomic Context describing neighboring genes Neighboring gene proprotein convertase subtilisin/kexin type 5-like Neighboring gene riboflavin kinase Neighboring gene uncharacterized LOC117797025 Neighboring gene prune homolog 2 with BCH domain Neighboring gene uncharacterized LOC117796922

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The sequence and de novo assembly of the giant panda genome. Li R, et al. Nature, 2010 Jan 21. PMID 20010809, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase
Names
glucosaminyl (N-acetyl) transferase 1, core 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048234.1 Reference ASM200744v2 Primary Assembly

    Range
    30647839..30673296
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034646963.1 → XP_034502854.1  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase

    UniProtKB/TrEMBL
    D2HPX9

  2. XM_011231368.3 → XP_011229670.1  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase

    See identical proteins and their annotated locations for XP_011229670.1

    UniProtKB/TrEMBL
    D2HPX9
    Conserved Domains (1) summary
    pfam02485
    Location:123 → 391
    Branch; Core-2/I-Branching enzyme

  3. XM_011231369.3 → XP_011229671.1  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase

    See identical proteins and their annotated locations for XP_011229671.1

    UniProtKB/TrEMBL
    D2HPX9
    Related
    ENSAMEP00000020084.1, ENSAMET00000020853.2
    Conserved Domains (1) summary
    pfam02485
    Location:123 → 391
    Branch; Core-2/I-Branching enzyme
Nucleotide Protein
Heading Accession and Version

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